Protein–RNA interactions for Protein: Q8WU76

SCFD2, Sec1 family domain-containing protein 2, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD2Q8WU76 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC28.38■■■□□ 2.13
SCFD2Q8WU76 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC28.38■■■□□ 2.13
SCFD2Q8WU76 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
SCFD2Q8WU76 AL033527.3-201ENST00000566366 1196 ntBASIC28.36■■■□□ 2.13
SCFD2Q8WU76 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
SCFD2Q8WU76 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCFD2Q8WU76 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCFD2Q8WU76 KRT18P60-201ENST00000312876 1297 ntBASIC28.35■■■□□ 2.13
SCFD2Q8WU76 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC28.35■■■□□ 2.13
SCFD2Q8WU76 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.35■■■□□ 2.13
SCFD2Q8WU76 AC139426.1-201ENST00000568218 2529 ntBASIC28.35■■■□□ 2.13
SCFD2Q8WU76 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC28.35■■■□□ 2.13
SCFD2Q8WU76 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SCFD2Q8WU76 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC28.35■■■□□ 2.13
SCFD2Q8WU76 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
SCFD2Q8WU76 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
SCFD2Q8WU76 AL359258.2-201ENST00000564063 1566 ntBASIC28.34■■■□□ 2.13
SCFD2Q8WU76 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
SCFD2Q8WU76 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC28.34■■■□□ 2.13
SCFD2Q8WU76 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SCFD2Q8WU76 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC28.33■■■□□ 2.13
SCFD2Q8WU76 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
SCFD2Q8WU76 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC28.33■■■□□ 2.13
SCFD2Q8WU76 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
SCFD2Q8WU76 REST-210ENST00000638187 1334 ntTSL 5 BASIC28.33■■■□□ 2.13
SCFD2Q8WU76 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC28.33■■■□□ 2.13
SCFD2Q8WU76 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
SCFD2Q8WU76 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
SCFD2Q8WU76 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SCFD2Q8WU76 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
SCFD2Q8WU76 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC28.31■■■□□ 2.12
SCFD2Q8WU76 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SCFD2Q8WU76 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SCFD2Q8WU76 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC28.31■■■□□ 2.12
SCFD2Q8WU76 AC007029.1-201ENST00000604183 313 ntBASIC28.31■■■□□ 2.12
SCFD2Q8WU76 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SCFD2Q8WU76 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC28.31■■■□□ 2.12
SCFD2Q8WU76 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SCFD2Q8WU76 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC28.3■■■□□ 2.12
SCFD2Q8WU76 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.3■■■□□ 2.12
SCFD2Q8WU76 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC28.3■■■□□ 2.12
SCFD2Q8WU76 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC28.29■■■□□ 2.12
SCFD2Q8WU76 AP002414.2-202ENST00000590929 1450 ntBASIC28.28■■■□□ 2.12
SCFD2Q8WU76 TSPY13P-201ENST00000338964 914 ntBASIC28.28■■■□□ 2.12
SCFD2Q8WU76 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SCFD2Q8WU76 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
SCFD2Q8WU76 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
SCFD2Q8WU76 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC28.27■■■□□ 2.12
SCFD2Q8WU76 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC28.27■■■□□ 2.12
SCFD2Q8WU76 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC28.27■■■□□ 2.12
SCFD2Q8WU76 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
SCFD2Q8WU76 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
SCFD2Q8WU76 AC004987.1-201ENST00000428627 508 ntBASIC28.26■■■□□ 2.11
SCFD2Q8WU76 ATP5G2P3-201ENST00000429083 425 ntBASIC28.26■■■□□ 2.11
SCFD2Q8WU76 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC28.26■■■□□ 2.11
SCFD2Q8WU76 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SCFD2Q8WU76 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SCFD2Q8WU76 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
SCFD2Q8WU76 SMPD5-203ENST00000639008 1464 ntBASIC28.25■■■□□ 2.11
SCFD2Q8WU76 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
SCFD2Q8WU76 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC28.24■■■□□ 2.11
SCFD2Q8WU76 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SCFD2Q8WU76 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SCFD2Q8WU76 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SCFD2Q8WU76 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC28.23■■■□□ 2.11
SCFD2Q8WU76 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC28.23■■■□□ 2.11
SCFD2Q8WU76 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC28.23■■■□□ 2.11
SCFD2Q8WU76 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SCFD2Q8WU76 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SCFD2Q8WU76 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.22■■■□□ 2.11
SCFD2Q8WU76 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
SCFD2Q8WU76 GFER-205ENST00000569451 517 ntTSL 5 BASIC28.22■■■□□ 2.11
SCFD2Q8WU76 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
SCFD2Q8WU76 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
SCFD2Q8WU76 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
SCFD2Q8WU76 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.2■■■□□ 2.1
SCFD2Q8WU76 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC28.2■■■□□ 2.1
SCFD2Q8WU76 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SCFD2Q8WU76 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
SCFD2Q8WU76 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC28.19■■■□□ 2.1
SCFD2Q8WU76 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC28.19■■■□□ 2.1
SCFD2Q8WU76 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC28.19■■■□□ 2.1
SCFD2Q8WU76 AC009831.1-201ENST00000580420 1582 ntBASIC28.19■■■□□ 2.1
SCFD2Q8WU76 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCFD2Q8WU76 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC28.18■■■□□ 2.1
SCFD2Q8WU76 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.18■■■□□ 2.1
SCFD2Q8WU76 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC28.18■■■□□ 2.1
SCFD2Q8WU76 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
SCFD2Q8WU76 AC025884.2-201ENST00000553429 711 ntBASIC28.18■■■□□ 2.1
SCFD2Q8WU76 AC133552.2-201ENST00000619106 1032 ntBASIC28.18■■■□□ 2.1
SCFD2Q8WU76 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCFD2Q8WU76 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC28.18■■■□□ 2.1
SCFD2Q8WU76 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SCFD2Q8WU76 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
SCFD2Q8WU76 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
SCFD2Q8WU76 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
SCFD2Q8WU76 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC28.17■■■□□ 2.1
SCFD2Q8WU76 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC28.17■■■□□ 2.1
SCFD2Q8WU76 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
SCFD2Q8WU76 GUK1-208ENST00000366728 842 ntTSL 2 BASIC28.16■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 14.6 ms