Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
PCDH19Q8TAB3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.84■■□□□ 1.73
PCDH19Q8TAB3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.84■■□□□ 1.73
PCDH19Q8TAB3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.73
PCDH19Q8TAB3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH19Q8TAB3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC25.83■■□□□ 1.73
PCDH19Q8TAB3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH19Q8TAB3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH19Q8TAB3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.83■■□□□ 1.73
PCDH19Q8TAB3 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.83■■□□□ 1.73
PCDH19Q8TAB3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
PCDH19Q8TAB3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
PCDH19Q8TAB3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.72
PCDH19Q8TAB3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
PCDH19Q8TAB3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.83■■□□□ 1.72
PCDH19Q8TAB3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC25.83■■□□□ 1.72
PCDH19Q8TAB3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH19Q8TAB3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
PCDH19Q8TAB3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.82■■□□□ 1.72
PCDH19Q8TAB3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC25.81■■□□□ 1.72
PCDH19Q8TAB3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
PCDH19Q8TAB3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
PCDH19Q8TAB3 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.8■■□□□ 1.72
PCDH19Q8TAB3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
PCDH19Q8TAB3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.79■■□□□ 1.72
PCDH19Q8TAB3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH19Q8TAB3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH19Q8TAB3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH19Q8TAB3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
PCDH19Q8TAB3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC25.79■■□□□ 1.72
PCDH19Q8TAB3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC25.78■■□□□ 1.72
PCDH19Q8TAB3 CR559946.2-201ENST00000623684 991 ntBASIC25.78■■□□□ 1.72
PCDH19Q8TAB3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH19Q8TAB3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
PCDH19Q8TAB3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC25.77■■□□□ 1.72
PCDH19Q8TAB3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDH19Q8TAB3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC25.77■■□□□ 1.72
PCDH19Q8TAB3 AL449106.1-201ENST00000608517 1980 ntBASIC25.76■■□□□ 1.71
PCDH19Q8TAB3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH19Q8TAB3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC25.75■■□□□ 1.71
PCDH19Q8TAB3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDH19Q8TAB3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 MIR3648-2-201ENST00000581792 180 ntBASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 MIR3648-1-201ENST00000615959 180 ntBASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC25.74■■□□□ 1.71
PCDH19Q8TAB3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDH19Q8TAB3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDH19Q8TAB3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDH19Q8TAB3 AC008813.1-201ENST00000536597 885 ntBASIC25.73■■□□□ 1.71
PCDH19Q8TAB3 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.73■■□□□ 1.71
PCDH19Q8TAB3 AC016575.1-201ENST00000607026 382 ntBASIC25.73■■□□□ 1.71
PCDH19Q8TAB3 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.73■■□□□ 1.71
PCDH19Q8TAB3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDH19Q8TAB3 MIR639-201ENST00000384974 98 ntBASIC25.72■■□□□ 1.71
PCDH19Q8TAB3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDH19Q8TAB3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
PCDH19Q8TAB3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC25.71■■□□□ 1.71
PCDH19Q8TAB3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH19Q8TAB3 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH19Q8TAB3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH19Q8TAB3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
PCDH19Q8TAB3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.7■■□□□ 1.7
PCDH19Q8TAB3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDH19Q8TAB3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDH19Q8TAB3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDH19Q8TAB3 WHAMMP3-201ENST00000611636 1609 ntBASIC25.7■■□□□ 1.7
PCDH19Q8TAB3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
PCDH19Q8TAB3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH19Q8TAB3 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDH19Q8TAB3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.69■■□□□ 1.7
PCDH19Q8TAB3 MIR4449-201ENST00000578365 66 ntBASIC25.69■■□□□ 1.7
PCDH19Q8TAB3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH19Q8TAB3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.68■■□□□ 1.7
PCDH19Q8TAB3 AC148477.6-201ENST00000623746 465 ntBASIC25.68■■□□□ 1.7
PCDH19Q8TAB3 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDH19Q8TAB3 MIR219A2-201ENST00000608502 1504 ntBASIC25.68■■□□□ 1.7
PCDH19Q8TAB3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH19Q8TAB3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH19Q8TAB3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH19Q8TAB3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH19Q8TAB3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDH19Q8TAB3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC25.67■■□□□ 1.7
PCDH19Q8TAB3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.66■■□□□ 1.7
PCDH19Q8TAB3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.66■■□□□ 1.7
PCDH19Q8TAB3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDH19Q8TAB3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDH19Q8TAB3 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
PCDH19Q8TAB3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDH19Q8TAB3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDH19Q8TAB3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC25.65■■□□□ 1.7
PCDH19Q8TAB3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC25.64■■□□□ 1.7
PCDH19Q8TAB3 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH19Q8TAB3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
PCDH19Q8TAB3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.64■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms