Protein–RNA interactions for Protein: Q8NBS3

SLC4A11, Sodium bicarbonate transporter-like protein 11, humanhuman

Predictions only

Length 891 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC4A11Q8NBS3 SHF-208ENST00000560734 1731 ntTSL 3 BASIC26.61■■□□□ 1.85
SLC4A11Q8NBS3 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
SLC4A11Q8NBS3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SLC4A11Q8NBS3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC4A11Q8NBS3 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
SLC4A11Q8NBS3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
SLC4A11Q8NBS3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.59■■□□□ 1.85
SLC4A11Q8NBS3 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SLC4A11Q8NBS3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.58■■□□□ 1.85
SLC4A11Q8NBS3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.58■■□□□ 1.85
SLC4A11Q8NBS3 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
SLC4A11Q8NBS3 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.58■■□□□ 1.85
SLC4A11Q8NBS3 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.58■■□□□ 1.85
SLC4A11Q8NBS3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.58■■□□□ 1.85
SLC4A11Q8NBS3 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
SLC4A11Q8NBS3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.57■■□□□ 1.84
SLC4A11Q8NBS3 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.57■■□□□ 1.84
SLC4A11Q8NBS3 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
SLC4A11Q8NBS3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
SLC4A11Q8NBS3 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
SLC4A11Q8NBS3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.56■■□□□ 1.84
SLC4A11Q8NBS3 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC4A11Q8NBS3 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.56■■□□□ 1.84
SLC4A11Q8NBS3 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC4A11Q8NBS3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
SLC4A11Q8NBS3 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC4A11Q8NBS3 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.55■■□□□ 1.84
SLC4A11Q8NBS3 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
SLC4A11Q8NBS3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
SLC4A11Q8NBS3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
SLC4A11Q8NBS3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.55■■□□□ 1.84
SLC4A11Q8NBS3 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SLC4A11Q8NBS3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
SLC4A11Q8NBS3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.54■■□□□ 1.84
SLC4A11Q8NBS3 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.54■■□□□ 1.84
SLC4A11Q8NBS3 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
SLC4A11Q8NBS3 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.54■■□□□ 1.84
SLC4A11Q8NBS3 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.54■■□□□ 1.84
SLC4A11Q8NBS3 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.53■■□□□ 1.84
SLC4A11Q8NBS3 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
SLC4A11Q8NBS3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
SLC4A11Q8NBS3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
SLC4A11Q8NBS3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.52■■□□□ 1.84
SLC4A11Q8NBS3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SLC4A11Q8NBS3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.52■■□□□ 1.84
SLC4A11Q8NBS3 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
SLC4A11Q8NBS3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.52■■□□□ 1.84
SLC4A11Q8NBS3 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.51■■□□□ 1.83
SLC4A11Q8NBS3 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SLC4A11Q8NBS3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
SLC4A11Q8NBS3 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
SLC4A11Q8NBS3 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.51■■□□□ 1.83
SLC4A11Q8NBS3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLC4A11Q8NBS3 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLC4A11Q8NBS3 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.5■■□□□ 1.83
SLC4A11Q8NBS3 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.5■■□□□ 1.83
SLC4A11Q8NBS3 WHAMMP3-201ENST00000611636 1609 ntBASIC26.5■■□□□ 1.83
SLC4A11Q8NBS3 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
SLC4A11Q8NBS3 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.49■■□□□ 1.83
SLC4A11Q8NBS3 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.49■■□□□ 1.83
SLC4A11Q8NBS3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
SLC4A11Q8NBS3 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLC4A11Q8NBS3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
SLC4A11Q8NBS3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.48■■□□□ 1.83
SLC4A11Q8NBS3 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC26.48■■□□□ 1.83
SLC4A11Q8NBS3 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
SLC4A11Q8NBS3 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC26.47■■□□□ 1.83
SLC4A11Q8NBS3 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
SLC4A11Q8NBS3 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
SLC4A11Q8NBS3 AL449106.1-201ENST00000608517 1980 ntBASIC26.46■■□□□ 1.83
SLC4A11Q8NBS3 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.46■■□□□ 1.83
SLC4A11Q8NBS3 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
SLC4A11Q8NBS3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
SLC4A11Q8NBS3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC26.46■■□□□ 1.83
SLC4A11Q8NBS3 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.83
SLC4A11Q8NBS3 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.45■■□□□ 1.82
SLC4A11Q8NBS3 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC26.45■■□□□ 1.82
SLC4A11Q8NBS3 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC26.44■■□□□ 1.82
SLC4A11Q8NBS3 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.44■■□□□ 1.82
SLC4A11Q8NBS3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
SLC4A11Q8NBS3 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
SLC4A11Q8NBS3 AL359258.2-201ENST00000564063 1566 ntBASIC26.43■■□□□ 1.82
SLC4A11Q8NBS3 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC4A11Q8NBS3 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC4A11Q8NBS3 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.42■■□□□ 1.82
SLC4A11Q8NBS3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.42■■□□□ 1.82
SLC4A11Q8NBS3 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.42■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms