Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
ATPAF2Q8N5M1 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATPAF2Q8N5M1 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
ATPAF2Q8N5M1 MIR219A2-201ENST00000608502 1504 ntBASIC25.59■■□□□ 1.69
ATPAF2Q8N5M1 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ATPAF2Q8N5M1 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
ATPAF2Q8N5M1 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC25.58■■□□□ 1.69
ATPAF2Q8N5M1 CHST11-203ENST00000547956 936 ntTSL 2 BASIC25.58■■□□□ 1.69
ATPAF2Q8N5M1 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATPAF2Q8N5M1 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC25.58■■□□□ 1.69
ATPAF2Q8N5M1 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATPAF2Q8N5M1 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC25.58■■□□□ 1.69
ATPAF2Q8N5M1 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
ATPAF2Q8N5M1 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ATPAF2Q8N5M1 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
ATPAF2Q8N5M1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC25.56■■□□□ 1.68
ATPAF2Q8N5M1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
ATPAF2Q8N5M1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC25.56■■□□□ 1.68
ATPAF2Q8N5M1 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.55■■□□□ 1.68
ATPAF2Q8N5M1 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC25.55■■□□□ 1.68
ATPAF2Q8N5M1 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 MIR639-201ENST00000384974 98 ntBASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.54■■□□□ 1.68
ATPAF2Q8N5M1 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATPAF2Q8N5M1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC25.53■■□□□ 1.68
ATPAF2Q8N5M1 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
ATPAF2Q8N5M1 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC25.53■■□□□ 1.68
ATPAF2Q8N5M1 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC25.53■■□□□ 1.68
ATPAF2Q8N5M1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATPAF2Q8N5M1 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC25.52■■□□□ 1.68
ATPAF2Q8N5M1 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
ATPAF2Q8N5M1 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC25.52■■□□□ 1.68
ATPAF2Q8N5M1 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC25.52■■□□□ 1.68
ATPAF2Q8N5M1 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
ATPAF2Q8N5M1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
ATPAF2Q8N5M1 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATPAF2Q8N5M1 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC25.51■■□□□ 1.67
ATPAF2Q8N5M1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATPAF2Q8N5M1 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
ATPAF2Q8N5M1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC25.5■■□□□ 1.67
ATPAF2Q8N5M1 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC25.5■■□□□ 1.67
ATPAF2Q8N5M1 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC25.5■■□□□ 1.67
ATPAF2Q8N5M1 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC25.5■■□□□ 1.67
ATPAF2Q8N5M1 AL121749.1-202ENST00000609313 2153 ntBASIC25.49■■□□□ 1.67
ATPAF2Q8N5M1 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC25.49■■□□□ 1.67
ATPAF2Q8N5M1 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
ATPAF2Q8N5M1 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
ATPAF2Q8N5M1 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC25.49■■□□□ 1.67
ATPAF2Q8N5M1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
ATPAF2Q8N5M1 WHAMMP3-201ENST00000611636 1609 ntBASIC25.48■■□□□ 1.67
ATPAF2Q8N5M1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.48■■□□□ 1.67
ATPAF2Q8N5M1 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
ATPAF2Q8N5M1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC25.48■■□□□ 1.67
ATPAF2Q8N5M1 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC25.48■■□□□ 1.67
ATPAF2Q8N5M1 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATPAF2Q8N5M1 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
ATPAF2Q8N5M1 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATPAF2Q8N5M1 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATPAF2Q8N5M1 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC25.47■■□□□ 1.67
ATPAF2Q8N5M1 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATPAF2Q8N5M1 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
ATPAF2Q8N5M1 MBP-237ENST00000579129 1052 ntTSL 5 BASIC25.47■■□□□ 1.67
ATPAF2Q8N5M1 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.47■■□□□ 1.67
ATPAF2Q8N5M1 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
ATPAF2Q8N5M1 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC25.46■■□□□ 1.67
ATPAF2Q8N5M1 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC25.46■■□□□ 1.67
ATPAF2Q8N5M1 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC25.46■■□□□ 1.67
ATPAF2Q8N5M1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC25.46■■□□□ 1.67
ATPAF2Q8N5M1 AL449106.1-201ENST00000608517 1980 ntBASIC25.45■■□□□ 1.67
ATPAF2Q8N5M1 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC25.45■■□□□ 1.66
ATPAF2Q8N5M1 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC25.44■■□□□ 1.66
ATPAF2Q8N5M1 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC25.44■■□□□ 1.66
ATPAF2Q8N5M1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ATPAF2Q8N5M1 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC25.43■■□□□ 1.66
ATPAF2Q8N5M1 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.43■■□□□ 1.66
ATPAF2Q8N5M1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC25.43■■□□□ 1.66
ATPAF2Q8N5M1 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.43■■□□□ 1.66
ATPAF2Q8N5M1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATPAF2Q8N5M1 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC25.42■■□□□ 1.66
ATPAF2Q8N5M1 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC25.42■■□□□ 1.66
ATPAF2Q8N5M1 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC25.42■■□□□ 1.66
ATPAF2Q8N5M1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATPAF2Q8N5M1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC25.42■■□□□ 1.66
ATPAF2Q8N5M1 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
ATPAF2Q8N5M1 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms