Protein–RNA interactions for Protein: Q8N584

TTC39C, Tetratricopeptide repeat protein 39C, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39CQ8N584 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.68■■□□□ 1.86
TTC39CQ8N584 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.67■■□□□ 1.86
TTC39CQ8N584 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39CQ8N584 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
TTC39CQ8N584 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39CQ8N584 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39CQ8N584 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39CQ8N584 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
TTC39CQ8N584 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39CQ8N584 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39CQ8N584 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.66■■□□□ 1.86
TTC39CQ8N584 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
TTC39CQ8N584 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.65■■□□□ 1.86
TTC39CQ8N584 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
TTC39CQ8N584 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.64■■□□□ 1.86
TTC39CQ8N584 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
TTC39CQ8N584 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
TTC39CQ8N584 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39CQ8N584 AC126177.7-201ENST00000547904 679 ntBASIC26.63■■□□□ 1.85
TTC39CQ8N584 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
TTC39CQ8N584 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
TTC39CQ8N584 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.62■■□□□ 1.85
TTC39CQ8N584 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
TTC39CQ8N584 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.62■■□□□ 1.85
TTC39CQ8N584 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
TTC39CQ8N584 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC26.61■■□□□ 1.85
TTC39CQ8N584 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC39CQ8N584 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC26.6■■□□□ 1.85
TTC39CQ8N584 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC26.6■■□□□ 1.85
TTC39CQ8N584 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
TTC39CQ8N584 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC39CQ8N584 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
TTC39CQ8N584 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
TTC39CQ8N584 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.6■■□□□ 1.85
TTC39CQ8N584 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
TTC39CQ8N584 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
TTC39CQ8N584 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC26.59■■□□□ 1.85
TTC39CQ8N584 WHAMMP3-201ENST00000611636 1609 ntBASIC26.58■■□□□ 1.85
TTC39CQ8N584 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
TTC39CQ8N584 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
TTC39CQ8N584 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TTC39CQ8N584 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.84
TTC39CQ8N584 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39CQ8N584 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
TTC39CQ8N584 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39CQ8N584 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.57■■□□□ 1.84
TTC39CQ8N584 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
TTC39CQ8N584 TPT1-202ENST00000379055 948 ntTSL 2 BASIC26.56■■□□□ 1.84
TTC39CQ8N584 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC26.56■■□□□ 1.84
TTC39CQ8N584 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.56■■□□□ 1.84
TTC39CQ8N584 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
TTC39CQ8N584 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC26.55■■□□□ 1.84
TTC39CQ8N584 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.55■■□□□ 1.84
TTC39CQ8N584 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC26.55■■□□□ 1.84
TTC39CQ8N584 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39CQ8N584 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC26.54■■□□□ 1.84
TTC39CQ8N584 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39CQ8N584 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
TTC39CQ8N584 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39CQ8N584 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39CQ8N584 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39CQ8N584 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.53■■□□□ 1.84
TTC39CQ8N584 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.53■■□□□ 1.84
TTC39CQ8N584 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC26.53■■□□□ 1.84
TTC39CQ8N584 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC26.53■■□□□ 1.84
TTC39CQ8N584 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.52■■□□□ 1.84
TTC39CQ8N584 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.52■■□□□ 1.84
TTC39CQ8N584 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC39CQ8N584 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC26.51■■□□□ 1.83
TTC39CQ8N584 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC26.51■■□□□ 1.83
TTC39CQ8N584 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TTC39CQ8N584 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
TTC39CQ8N584 AL359258.2-201ENST00000564063 1566 ntBASIC26.5■■□□□ 1.83
TTC39CQ8N584 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
TTC39CQ8N584 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.49■■□□□ 1.83
TTC39CQ8N584 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.49■■□□□ 1.83
TTC39CQ8N584 MED25-210ENST00000612854 801 ntTSL 5 BASIC26.48■■□□□ 1.83
TTC39CQ8N584 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC26.48■■□□□ 1.83
TTC39CQ8N584 MED25-214ENST00000622402 642 ntTSL 5 BASIC26.48■■□□□ 1.83
TTC39CQ8N584 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
TTC39CQ8N584 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
TTC39CQ8N584 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
TTC39CQ8N584 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.46■■□□□ 1.83
TTC39CQ8N584 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
TTC39CQ8N584 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.46■■□□□ 1.83
TTC39CQ8N584 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC26.46■■□□□ 1.83
TTC39CQ8N584 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.46■■□□□ 1.83
TTC39CQ8N584 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC26.46■■□□□ 1.83
TTC39CQ8N584 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC26.45■■□□□ 1.82
TTC39CQ8N584 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.45■■□□□ 1.82
TTC39CQ8N584 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC26.45■■□□□ 1.82
TTC39CQ8N584 AL449106.1-201ENST00000608517 1980 ntBASIC26.44■■□□□ 1.82
TTC39CQ8N584 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC26.43■■□□□ 1.82
TTC39CQ8N584 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.43■■□□□ 1.82
TTC39CQ8N584 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TTC39CQ8N584 AC060814.1-201ENST00000554326 538 ntBASIC26.43■■□□□ 1.82
TTC39CQ8N584 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TTC39CQ8N584 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TTC39CQ8N584 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
TTC39CQ8N584 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms