Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LYSMD2Q8IV50 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LYSMD2Q8IV50 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
LYSMD2Q8IV50 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.89■■□□□ 1.09
LYSMD2Q8IV50 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.89■■□□□ 1.09
LYSMD2Q8IV50 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
LYSMD2Q8IV50 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LYSMD2Q8IV50 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 LINC00543-201ENST00000567234 1845 ntBASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD2Q8IV50 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
LYSMD2Q8IV50 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD2Q8IV50 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.79■■□□□ 1.08
LYSMD2Q8IV50 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD2Q8IV50 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD2Q8IV50 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD2Q8IV50 AC079834.2-201ENST00000609776 1949 ntBASIC21.78■■□□□ 1.08
LYSMD2Q8IV50 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD2Q8IV50 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD2Q8IV50 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.77■■□□□ 1.08
LYSMD2Q8IV50 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD2Q8IV50 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD2Q8IV50 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD2Q8IV50 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 CLDN5-201ENST00000403084 2357 ntBASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.74■■□□□ 1.07
LYSMD2Q8IV50 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 AC068473.5-201ENST00000616428 2072 ntBASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 1325.3 ms