Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.91■■□□□ 1.1
LYSMD2Q8IV50 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
LYSMD2Q8IV50 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
LYSMD2Q8IV50 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.1
LYSMD2Q8IV50 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC21.89■■□□□ 1.1
LYSMD2Q8IV50 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.89■■□□□ 1.09
LYSMD2Q8IV50 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.89■■□□□ 1.09
LYSMD2Q8IV50 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC21.89■■□□□ 1.09
LYSMD2Q8IV50 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
LYSMD2Q8IV50 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 AGPAT2-202ENST00000371696 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.88■■□□□ 1.09
LYSMD2Q8IV50 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
LYSMD2Q8IV50 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.86■■□□□ 1.09
LYSMD2Q8IV50 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 LINC00543-201ENST00000567234 1845 ntBASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
LYSMD2Q8IV50 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
LYSMD2Q8IV50 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.09
LYSMD2Q8IV50 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
LYSMD2Q8IV50 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
LYSMD2Q8IV50 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
LYSMD2Q8IV50 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 PREB-202ENST00000406567 1910 ntTSL 5 BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.8■■□□□ 1.08
LYSMD2Q8IV50 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD2Q8IV50 AC068152.1-207ENST00000573341 647 ntTSL 2 BASIC21.79■■□□□ 1.08
LYSMD2Q8IV50 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
LYSMD2Q8IV50 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD2Q8IV50 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
LYSMD2Q8IV50 AC079834.2-201ENST00000609776 1949 ntBASIC21.78■■□□□ 1.08
LYSMD2Q8IV50 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD2Q8IV50 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD2Q8IV50 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.77■■□□□ 1.08
LYSMD2Q8IV50 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
LYSMD2Q8IV50 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD2Q8IV50 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC21.76■■□□□ 1.07
LYSMD2Q8IV50 ECI1-201ENST00000301729 1541 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 CLDN5-201ENST00000403084 2357 ntBASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
LYSMD2Q8IV50 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.74■■□□□ 1.07
LYSMD2Q8IV50 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 AC068473.5-201ENST00000616428 2072 ntBASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
LYSMD2Q8IV50 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 TP53I13-201ENST00000301057 1530 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 ANAPC11-203ENST00000392376 687 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
LYSMD2Q8IV50 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms