Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13BQ7Z7G8 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13BQ7Z7G8 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
VPS13BQ7Z7G8 DUX4L9-201ENST00000449051 1259 ntBASIC15.68■□□□□ 0.1
VPS13BQ7Z7G8 AC103834.1-201ENST00000520383 144 ntBASIC15.68■□□□□ 0.1
VPS13BQ7Z7G8 AC100797.4-201ENST00000631653 1827 ntBASIC15.68■□□□□ 0.1
VPS13BQ7Z7G8 AC025884.2-201ENST00000553429 711 ntBASIC15.68■□□□□ 0.1
VPS13BQ7Z7G8 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
VPS13BQ7Z7G8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC15.67■□□□□ 0.1
VPS13BQ7Z7G8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
VPS13BQ7Z7G8 HES6-204ENST00000409182 863 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13BQ7Z7G8 MIR935-201ENST00000401179 91 ntBASIC15.67■□□□□ 0.1
VPS13BQ7Z7G8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC15.67■□□□□ 0.1
VPS13BQ7Z7G8 C16orf95-201ENST00000253461 953 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13BQ7Z7G8 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13BQ7Z7G8 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13BQ7Z7G8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
VPS13BQ7Z7G8 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC15.66■□□□□ 0.1
VPS13BQ7Z7G8 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
VPS13BQ7Z7G8 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 AC131212.1-201ENST00000613771 668 ntBASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 AC133552.2-201ENST00000619106 1032 ntBASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 KRT8P33-201ENST00000508125 1423 ntBASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 AC026202.3-201ENST00000600805 1127 ntBASIC15.65■□□□□ 0.1
VPS13BQ7Z7G8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13BQ7Z7G8 RAP2CP1-202ENST00000605179 643 ntBASIC15.64■□□□□ 0.09
VPS13BQ7Z7G8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13BQ7Z7G8 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13BQ7Z7G8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
VPS13BQ7Z7G8 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
VPS13BQ7Z7G8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
VPS13BQ7Z7G8 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13BQ7Z7G8 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC15.63■□□□□ 0.09
VPS13BQ7Z7G8 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS13BQ7Z7G8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 GUSBP5-201ENST00000418136 578 ntBASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS13BQ7Z7G8 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13BQ7Z7G8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VPS13BQ7Z7G8 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13BQ7Z7G8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC15.61■□□□□ 0.09
VPS13BQ7Z7G8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13BQ7Z7G8 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS13BQ7Z7G8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC15.61■□□□□ 0.09
VPS13BQ7Z7G8 AC010980.1-201ENST00000587192 1142 ntBASIC15.61■□□□□ 0.09
VPS13BQ7Z7G8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS13BQ7Z7G8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
VPS13BQ7Z7G8 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC15.6■□□□□ 0.09
VPS13BQ7Z7G8 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
VPS13BQ7Z7G8 AC126177.7-201ENST00000547904 679 ntBASIC15.6■□□□□ 0.09
VPS13BQ7Z7G8 BEX3-202ENST00000372634 753 ntTSL 2 BASIC15.59■□□□□ 0.09
VPS13BQ7Z7G8 SPCS2P3-201ENST00000500401 656 ntBASIC15.59■□□□□ 0.09
VPS13BQ7Z7G8 REST-210ENST00000638187 1334 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS13BQ7Z7G8 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
VPS13BQ7Z7G8 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
VPS13BQ7Z7G8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC15.59■□□□□ 0.09
VPS13BQ7Z7G8 AL356441.2-201ENST00000443009 864 ntBASIC15.59■□□□□ 0.09
VPS13BQ7Z7G8 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
VPS13BQ7Z7G8 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
VPS13BQ7Z7G8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
VPS13BQ7Z7G8 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC15.58■□□□□ 0.09
VPS13BQ7Z7G8 AC139795.1-202ENST00000500444 432 ntBASIC15.58■□□□□ 0.08
VPS13BQ7Z7G8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
VPS13BQ7Z7G8 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VPS13BQ7Z7G8 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC15.58■□□□□ 0.08
VPS13BQ7Z7G8 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
VPS13BQ7Z7G8 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13BQ7Z7G8 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC15.57■□□□□ 0.08
VPS13BQ7Z7G8 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13BQ7Z7G8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13BQ7Z7G8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13BQ7Z7G8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC15.57■□□□□ 0.08
VPS13BQ7Z7G8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
VPS13BQ7Z7G8 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC15.56■□□□□ 0.08
VPS13BQ7Z7G8 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
VPS13BQ7Z7G8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS13BQ7Z7G8 BHLHE23-202ENST00000612929 1109 ntBASIC15.56■□□□□ 0.08
VPS13BQ7Z7G8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC15.56■□□□□ 0.08
VPS13BQ7Z7G8 ABCB10P3-201ENST00000561950 2166 ntBASIC15.56■□□□□ 0.08
VPS13BQ7Z7G8 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
VPS13BQ7Z7G8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
VPS13BQ7Z7G8 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
VPS13BQ7Z7G8 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC15.55■□□□□ 0.08
VPS13BQ7Z7G8 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC15.55■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms