Protein–RNA interactions for Protein: Q7L7L0

HIST3H2A, Histone H2A type 3, humanhuman

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2AQ7L7L0 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
HIST3H2AQ7L7L0 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HIST3H2AQ7L7L0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.57■■□□□ 1.2
HIST3H2AQ7L7L0 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HIST3H2AQ7L7L0 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
HIST3H2AQ7L7L0 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.56■■□□□ 1.2
HIST3H2AQ7L7L0 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.56■■□□□ 1.2
HIST3H2AQ7L7L0 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.56■■□□□ 1.2
HIST3H2AQ7L7L0 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
HIST3H2AQ7L7L0 LINC01971-201ENST00000617888 1048 ntBASIC22.56■■□□□ 1.2
HIST3H2AQ7L7L0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.55■■□□□ 1.2
HIST3H2AQ7L7L0 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC22.55■■□□□ 1.2
HIST3H2AQ7L7L0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HIST3H2AQ7L7L0 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.55■■□□□ 1.2
HIST3H2AQ7L7L0 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HIST3H2AQ7L7L0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
HIST3H2AQ7L7L0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC22.54■■□□□ 1.2
HIST3H2AQ7L7L0 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HIST3H2AQ7L7L0 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HIST3H2AQ7L7L0 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HIST3H2AQ7L7L0 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.53■■□□□ 1.2
HIST3H2AQ7L7L0 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HIST3H2AQ7L7L0 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.53■■□□□ 1.2
HIST3H2AQ7L7L0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HIST3H2AQ7L7L0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC22.52■■□□□ 1.2
HIST3H2AQ7L7L0 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
HIST3H2AQ7L7L0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.51■■□□□ 1.19
HIST3H2AQ7L7L0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HIST3H2AQ7L7L0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.5■■□□□ 1.19
HIST3H2AQ7L7L0 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.49■■□□□ 1.19
HIST3H2AQ7L7L0 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
HIST3H2AQ7L7L0 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
HIST3H2AQ7L7L0 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HIST3H2AQ7L7L0 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
HIST3H2AQ7L7L0 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST3H2AQ7L7L0 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST3H2AQ7L7L0 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST3H2AQ7L7L0 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST3H2AQ7L7L0 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
HIST3H2AQ7L7L0 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.48■■□□□ 1.19
HIST3H2AQ7L7L0 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
HIST3H2AQ7L7L0 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.48■■□□□ 1.19
HIST3H2AQ7L7L0 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
HIST3H2AQ7L7L0 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DUX4L13-201ENST00000554103 1267 ntBASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DUX4L15-201ENST00000611059 1267 ntBASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DUX4L23-201ENST00000615195 1269 ntBASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DUX4L24-201ENST00000617576 1269 ntBASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DUX4L22-201ENST00000618238 1269 ntBASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DUX4L20-201ENST00000619712 1269 ntBASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DUX4L21-201ENST00000622058 1269 ntBASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DUX4L10-201ENST00000622460 1267 ntBASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 DUX4L25-201ENST00000624915 1269 ntBASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.46■■□□□ 1.19
HIST3H2AQ7L7L0 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.19
HIST3H2AQ7L7L0 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
HIST3H2AQ7L7L0 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.45■■□□□ 1.18
HIST3H2AQ7L7L0 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
HIST3H2AQ7L7L0 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST3H2AQ7L7L0 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST3H2AQ7L7L0 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST3H2AQ7L7L0 ZNRF2P2-203ENST00000454624 420 ntBASIC22.44■■□□□ 1.18
HIST3H2AQ7L7L0 DUX4L11-201ENST00000611504 1267 ntBASIC22.44■■□□□ 1.18
HIST3H2AQ7L7L0 DUX4L12-201ENST00000614593 1267 ntBASIC22.44■■□□□ 1.18
HIST3H2AQ7L7L0 DUX4L14-201ENST00000621227 1267 ntBASIC22.44■■□□□ 1.18
HIST3H2AQ7L7L0 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST3H2AQ7L7L0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
HIST3H2AQ7L7L0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST3H2AQ7L7L0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST3H2AQ7L7L0 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.43■■□□□ 1.18
HIST3H2AQ7L7L0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.43■■□□□ 1.18
HIST3H2AQ7L7L0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
HIST3H2AQ7L7L0 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.43■■□□□ 1.18
HIST3H2AQ7L7L0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.43■■□□□ 1.18
HIST3H2AQ7L7L0 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.43■■□□□ 1.18
HIST3H2AQ7L7L0 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
HIST3H2AQ7L7L0 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
HIST3H2AQ7L7L0 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HIST3H2AQ7L7L0 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
HIST3H2AQ7L7L0 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HIST3H2AQ7L7L0 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.41■■□□□ 1.18
HIST3H2AQ7L7L0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.41■■□□□ 1.18
HIST3H2AQ7L7L0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
HIST3H2AQ7L7L0 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
HIST3H2AQ7L7L0 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms