Protein–RNA interactions for Protein: Q71DI3

HIST2H3A, Histone H3.2, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3AQ71DI3 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST2H3AQ71DI3 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC21.87■■□□□ 1.09
HIST2H3AQ71DI3 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
HIST2H3AQ71DI3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.87■■□□□ 1.09
HIST2H3AQ71DI3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
HIST2H3AQ71DI3 ABHD17AP4-201ENST00000411545 909 ntBASIC21.86■■□□□ 1.09
HIST2H3AQ71DI3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
HIST2H3AQ71DI3 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC21.86■■□□□ 1.09
HIST2H3AQ71DI3 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
HIST2H3AQ71DI3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H3AQ71DI3 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H3AQ71DI3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H3AQ71DI3 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
HIST2H3AQ71DI3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST2H3AQ71DI3 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.84■■□□□ 1.09
HIST2H3AQ71DI3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
HIST2H3AQ71DI3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
HIST2H3AQ71DI3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIST2H3AQ71DI3 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
HIST2H3AQ71DI3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.09
HIST2H3AQ71DI3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.08
HIST2H3AQ71DI3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
HIST2H3AQ71DI3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
HIST2H3AQ71DI3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC21.83■■□□□ 1.08
HIST2H3AQ71DI3 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
HIST2H3AQ71DI3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
HIST2H3AQ71DI3 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST2H3AQ71DI3 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST2H3AQ71DI3 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
HIST2H3AQ71DI3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
HIST2H3AQ71DI3 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.81■■□□□ 1.08
HIST2H3AQ71DI3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC21.81■■□□□ 1.08
HIST2H3AQ71DI3 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC21.81■■□□□ 1.08
HIST2H3AQ71DI3 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HIST2H3AQ71DI3 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
HIST2H3AQ71DI3 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
HIST2H3AQ71DI3 AC008813.1-201ENST00000536597 885 ntBASIC21.81■■□□□ 1.08
HIST2H3AQ71DI3 CHST11-202ENST00000546689 756 ntTSL 2 BASIC21.81■■□□□ 1.08
HIST2H3AQ71DI3 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H3AQ71DI3 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H3AQ71DI3 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
HIST2H3AQ71DI3 AGPS-202ENST00000409888 815 ntTSL 4 BASIC21.8■■□□□ 1.08
HIST2H3AQ71DI3 HES6-205ENST00000409356 528 ntTSL 2 BASIC21.79■■□□□ 1.08
HIST2H3AQ71DI3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC21.79■■□□□ 1.08
HIST2H3AQ71DI3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC21.79■■□□□ 1.08
HIST2H3AQ71DI3 AL449106.1-201ENST00000608517 1980 ntBASIC21.78■■□□□ 1.08
HIST2H3AQ71DI3 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC21.78■■□□□ 1.08
HIST2H3AQ71DI3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.78■■□□□ 1.08
HIST2H3AQ71DI3 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HIST2H3AQ71DI3 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HIST2H3AQ71DI3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST2H3AQ71DI3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
HIST2H3AQ71DI3 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HIST2H3AQ71DI3 WHAMMP3-201ENST00000611636 1609 ntBASIC21.77■■□□□ 1.07
HIST2H3AQ71DI3 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC21.76■■□□□ 1.07
HIST2H3AQ71DI3 AC148477.6-201ENST00000623746 465 ntBASIC21.76■■□□□ 1.07
HIST2H3AQ71DI3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H3AQ71DI3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H3AQ71DI3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HIST2H3AQ71DI3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC21.76■■□□□ 1.07
HIST2H3AQ71DI3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST2H3AQ71DI3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC21.75■■□□□ 1.07
HIST2H3AQ71DI3 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST2H3AQ71DI3 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HIST2H3AQ71DI3 CR559946.2-201ENST00000623684 991 ntBASIC21.75■■□□□ 1.07
HIST2H3AQ71DI3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC21.75■■□□□ 1.07
HIST2H3AQ71DI3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST2H3AQ71DI3 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
HIST2H3AQ71DI3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC21.74■■□□□ 1.07
HIST2H3AQ71DI3 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.74■■□□□ 1.07
HIST2H3AQ71DI3 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST2H3AQ71DI3 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
HIST2H3AQ71DI3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
HIST2H3AQ71DI3 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H3AQ71DI3 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H3AQ71DI3 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H3AQ71DI3 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H3AQ71DI3 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.73■■□□□ 1.07
HIST2H3AQ71DI3 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H3AQ71DI3 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
HIST2H3AQ71DI3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.72■■□□□ 1.07
HIST2H3AQ71DI3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
HIST2H3AQ71DI3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
HIST2H3AQ71DI3 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.72■■□□□ 1.07
HIST2H3AQ71DI3 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC21.72■■□□□ 1.07
HIST2H3AQ71DI3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
HIST2H3AQ71DI3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 HLA-V-202ENST00000446817 847 ntBASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
HIST2H3AQ71DI3 MIR219A2-201ENST00000608502 1504 ntBASIC21.7■■□□□ 1.07
HIST2H3AQ71DI3 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC21.7■■□□□ 1.06
HIST2H3AQ71DI3 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
HIST2H3AQ71DI3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms