Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DCLRE1AQ6PJP8 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC26.86■■□□□ 1.89
DCLRE1AQ6PJP8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC26.86■■□□□ 1.89
DCLRE1AQ6PJP8 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC26.86■■□□□ 1.89
DCLRE1AQ6PJP8 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
DCLRE1AQ6PJP8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC26.86■■□□□ 1.89
DCLRE1AQ6PJP8 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
DCLRE1AQ6PJP8 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.85■■□□□ 1.89
DCLRE1AQ6PJP8 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.85■■□□□ 1.89
DCLRE1AQ6PJP8 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC26.85■■□□□ 1.89
DCLRE1AQ6PJP8 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
DCLRE1AQ6PJP8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DCLRE1AQ6PJP8 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
DCLRE1AQ6PJP8 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
DCLRE1AQ6PJP8 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.89
DCLRE1AQ6PJP8 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
DCLRE1AQ6PJP8 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC26.83■■□□□ 1.89
DCLRE1AQ6PJP8 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.83■■□□□ 1.89
DCLRE1AQ6PJP8 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC26.83■■□□□ 1.89
DCLRE1AQ6PJP8 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.88
DCLRE1AQ6PJP8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC26.82■■□□□ 1.88
DCLRE1AQ6PJP8 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.82■■□□□ 1.88
DCLRE1AQ6PJP8 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
DCLRE1AQ6PJP8 U85056.1-201ENST00000616429 682 ntBASIC26.82■■□□□ 1.88
DCLRE1AQ6PJP8 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.81■■□□□ 1.88
DCLRE1AQ6PJP8 AC018358.1-201ENST00000631079 1402 ntBASIC26.81■■□□□ 1.88
DCLRE1AQ6PJP8 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC26.81■■□□□ 1.88
DCLRE1AQ6PJP8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.8■■□□□ 1.88
DCLRE1AQ6PJP8 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC26.8■■□□□ 1.88
DCLRE1AQ6PJP8 AC012354.3-201ENST00000623734 483 ntBASIC26.8■■□□□ 1.88
DCLRE1AQ6PJP8 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DCLRE1AQ6PJP8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
DCLRE1AQ6PJP8 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DCLRE1AQ6PJP8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
DCLRE1AQ6PJP8 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.78■■□□□ 1.88
DCLRE1AQ6PJP8 REST-210ENST00000638187 1334 ntTSL 5 BASIC26.77■■□□□ 1.88
DCLRE1AQ6PJP8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC26.76■■□□□ 1.87
DCLRE1AQ6PJP8 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC26.76■■□□□ 1.87
DCLRE1AQ6PJP8 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.76■■□□□ 1.87
DCLRE1AQ6PJP8 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC26.76■■□□□ 1.87
DCLRE1AQ6PJP8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
DCLRE1AQ6PJP8 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC26.76■■□□□ 1.87
DCLRE1AQ6PJP8 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
DCLRE1AQ6PJP8 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
DCLRE1AQ6PJP8 SMPD5-203ENST00000639008 1464 ntBASIC26.75■■□□□ 1.87
DCLRE1AQ6PJP8 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.75■■□□□ 1.87
DCLRE1AQ6PJP8 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC26.75■■□□□ 1.87
DCLRE1AQ6PJP8 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
DCLRE1AQ6PJP8 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DCLRE1AQ6PJP8 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DCLRE1AQ6PJP8 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DCLRE1AQ6PJP8 AC007029.1-201ENST00000604183 313 ntBASIC26.74■■□□□ 1.87
DCLRE1AQ6PJP8 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC26.74■■□□□ 1.87
DCLRE1AQ6PJP8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
DCLRE1AQ6PJP8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
DCLRE1AQ6PJP8 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
DCLRE1AQ6PJP8 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
DCLRE1AQ6PJP8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
DCLRE1AQ6PJP8 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
DCLRE1AQ6PJP8 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC26.72■■□□□ 1.87
DCLRE1AQ6PJP8 AC139426.1-201ENST00000568218 2529 ntBASIC26.72■■□□□ 1.87
DCLRE1AQ6PJP8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DCLRE1AQ6PJP8 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
DCLRE1AQ6PJP8 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
DCLRE1AQ6PJP8 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC26.71■■□□□ 1.87
DCLRE1AQ6PJP8 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
DCLRE1AQ6PJP8 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC26.71■■□□□ 1.87
DCLRE1AQ6PJP8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC26.7■■□□□ 1.87
DCLRE1AQ6PJP8 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.7■■□□□ 1.86
DCLRE1AQ6PJP8 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
DCLRE1AQ6PJP8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
DCLRE1AQ6PJP8 AC025884.2-201ENST00000553429 711 ntBASIC26.69■■□□□ 1.86
DCLRE1AQ6PJP8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.69■■□□□ 1.86
DCLRE1AQ6PJP8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC26.69■■□□□ 1.86
DCLRE1AQ6PJP8 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC26.69■■□□□ 1.86
DCLRE1AQ6PJP8 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DCLRE1AQ6PJP8 KRT18P60-201ENST00000312876 1297 ntBASIC26.68■■□□□ 1.86
DCLRE1AQ6PJP8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
DCLRE1AQ6PJP8 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
DCLRE1AQ6PJP8 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
DCLRE1AQ6PJP8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
DCLRE1AQ6PJP8 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC26.68■■□□□ 1.86
DCLRE1AQ6PJP8 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DCLRE1AQ6PJP8 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
DCLRE1AQ6PJP8 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC26.67■■□□□ 1.86
DCLRE1AQ6PJP8 SNX24-201ENST00000261369 2158 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DCLRE1AQ6PJP8 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
DCLRE1AQ6PJP8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC26.67■■□□□ 1.86
DCLRE1AQ6PJP8 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC26.67■■□□□ 1.86
DCLRE1AQ6PJP8 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
DCLRE1AQ6PJP8 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DCLRE1AQ6PJP8 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DCLRE1AQ6PJP8 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC26.65■■□□□ 1.86
DCLRE1AQ6PJP8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
DCLRE1AQ6PJP8 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
DCLRE1AQ6PJP8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.65■■□□□ 1.86
DCLRE1AQ6PJP8 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC26.64■■□□□ 1.86
DCLRE1AQ6PJP8 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
DCLRE1AQ6PJP8 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
DCLRE1AQ6PJP8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms