Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.34■■□□□ 1.49
CCSMST1Q4G0I0 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
CCSMST1Q4G0I0 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
CCSMST1Q4G0I0 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.33■■□□□ 1.48
CCSMST1Q4G0I0 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.33■■□□□ 1.48
CCSMST1Q4G0I0 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.32■■□□□ 1.48
CCSMST1Q4G0I0 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.31■■□□□ 1.48
CCSMST1Q4G0I0 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCSMST1Q4G0I0 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.3■■□□□ 1.48
CCSMST1Q4G0I0 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCSMST1Q4G0I0 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.28■■□□□ 1.48
CCSMST1Q4G0I0 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 MIR4449-201ENST00000578365 66 ntBASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCSMST1Q4G0I0 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC24.26■■□□□ 1.47
CCSMST1Q4G0I0 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCSMST1Q4G0I0 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.25■■□□□ 1.47
CCSMST1Q4G0I0 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCSMST1Q4G0I0 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 MED25-210ENST00000612854 801 ntTSL 5 BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 MED25-214ENST00000622402 642 ntTSL 5 BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCSMST1Q4G0I0 AL121749.1-202ENST00000609313 2153 ntBASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCSMST1Q4G0I0 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
CCSMST1Q4G0I0 AL449106.1-201ENST00000608517 1980 ntBASIC24.22■■□□□ 1.47
CCSMST1Q4G0I0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
CCSMST1Q4G0I0 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
CCSMST1Q4G0I0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.21■■□□□ 1.47
CCSMST1Q4G0I0 WHAMMP3-201ENST00000611636 1609 ntBASIC24.21■■□□□ 1.47
CCSMST1Q4G0I0 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
CCSMST1Q4G0I0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
CCSMST1Q4G0I0 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC24.2■■□□□ 1.46
CCSMST1Q4G0I0 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
CCSMST1Q4G0I0 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCSMST1Q4G0I0 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
CCSMST1Q4G0I0 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
CCSMST1Q4G0I0 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 124 ms