Protein–RNA interactions for Protein: P78556

CCL20, C-C motif chemokine 20, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL20P78556 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CCL20P78556 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CCL20P78556 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
CCL20P78556 AC006077.2-201ENST00000623591 457 ntBASIC19.65■□□□□ 0.74
CCL20P78556 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
CCL20P78556 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
CCL20P78556 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL20P78556 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CCL20P78556 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC19.64■□□□□ 0.74
CCL20P78556 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CCL20P78556 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL20P78556 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL20P78556 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC19.64■□□□□ 0.73
CCL20P78556 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL20P78556 CDKN2D-202ENST00000393599 1422 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL20P78556 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
CCL20P78556 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CCL20P78556 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CCL20P78556 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CCL20P78556 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CCL20P78556 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL20P78556 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CCL20P78556 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL20P78556 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CCL20P78556 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CCL20P78556 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CCL20P78556 AL031258.1-201ENST00000623562 325 ntBASIC19.62■□□□□ 0.73
CCL20P78556 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC19.62■□□□□ 0.73
CCL20P78556 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL20P78556 TMEM202-AS1-202ENST00000565181 2325 ntBASIC19.61■□□□□ 0.73
CCL20P78556 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC19.61■□□□□ 0.73
CCL20P78556 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL20P78556 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CCL20P78556 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL20P78556 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL20P78556 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC19.6■□□□□ 0.73
CCL20P78556 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCL20P78556 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
CCL20P78556 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
CCL20P78556 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
CCL20P78556 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL20P78556 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL20P78556 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL20P78556 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
CCL20P78556 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
CCL20P78556 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC19.58■□□□□ 0.73
CCL20P78556 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
CCL20P78556 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.73
CCL20P78556 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
CCL20P78556 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
CCL20P78556 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
CCL20P78556 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC19.58■□□□□ 0.72
CCL20P78556 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC19.57■□□□□ 0.72
CCL20P78556 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
CCL20P78556 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL20P78556 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL20P78556 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC19.56■□□□□ 0.72
CCL20P78556 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCL20P78556 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCL20P78556 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCL20P78556 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCL20P78556 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCL20P78556 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCL20P78556 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC19.55■□□□□ 0.72
CCL20P78556 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCL20P78556 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC19.55■□□□□ 0.72
CCL20P78556 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCL20P78556 PREB-202ENST00000406567 1910 ntTSL 5 BASIC19.55■□□□□ 0.72
CCL20P78556 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL20P78556 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL20P78556 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL20P78556 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CCL20P78556 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCL20P78556 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCL20P78556 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCL20P78556 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.53■□□□□ 0.72
CCL20P78556 AC018358.1-201ENST00000631079 1402 ntBASIC19.53■□□□□ 0.72
CCL20P78556 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCL20P78556 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.53■□□□□ 0.72
CCL20P78556 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC19.53■□□□□ 0.72
CCL20P78556 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCL20P78556 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCL20P78556 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCL20P78556 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCL20P78556 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCL20P78556 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL20P78556 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL20P78556 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC19.52■□□□□ 0.72
CCL20P78556 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
CCL20P78556 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL20P78556 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL20P78556 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
CCL20P78556 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL20P78556 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCL20P78556 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.52■□□□□ 0.72
CCL20P78556 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.71
CCL20P78556 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC19.51■□□□□ 0.71
CCL20P78556 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL20P78556 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
CCL20P78556 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC19.5■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 10.1 ms