Protein–RNA interactions for Protein: P62979

RPS27A, Ubiquitin-40S ribosomal protein S27a, humanhuman

Known RBP Predictions only

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS27AP62979 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
RPS27AP62979 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPS27AP62979 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPS27AP62979 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC21.33■■□□□ 1.01
RPS27AP62979 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
RPS27AP62979 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.33■■□□□ 1.01
RPS27AP62979 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC21.32■■□□□ 1
RPS27AP62979 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC21.32■■□□□ 1
RPS27AP62979 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPS27AP62979 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
RPS27AP62979 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.32■■□□□ 1
RPS27AP62979 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.32■■□□□ 1
RPS27AP62979 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPS27AP62979 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPS27AP62979 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
RPS27AP62979 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPS27AP62979 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC21.31■■□□□ 1
RPS27AP62979 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPS27AP62979 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
RPS27AP62979 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
RPS27AP62979 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
RPS27AP62979 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.29■■□□□ 1
RPS27AP62979 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
RPS27AP62979 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPS27AP62979 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC21.29■■□□□ 1
RPS27AP62979 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
RPS27AP62979 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
RPS27AP62979 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC21.28■■□□□ 1
RPS27AP62979 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPS27AP62979 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.28■■□□□ 1
RPS27AP62979 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC21.28■■□□□ 1
RPS27AP62979 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
RPS27AP62979 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
RPS27AP62979 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC21.27■■□□□ 1
RPS27AP62979 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPS27AP62979 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC21.27■■□□□ 1
RPS27AP62979 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
RPS27AP62979 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
RPS27AP62979 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
RPS27AP62979 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.26■□□□□ 0.99
RPS27AP62979 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
RPS27AP62979 DUX4L28-201ENST00000623687 678 ntBASIC21.26■□□□□ 0.99
RPS27AP62979 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPS27AP62979 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC21.25■□□□□ 0.99
RPS27AP62979 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPS27AP62979 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.25■□□□□ 0.99
RPS27AP62979 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
RPS27AP62979 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
RPS27AP62979 AC145676.1-201ENST00000514988 2004 ntBASIC21.24■□□□□ 0.99
RPS27AP62979 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPS27AP62979 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPS27AP62979 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPS27AP62979 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPS27AP62979 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC21.23■□□□□ 0.99
RPS27AP62979 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPS27AP62979 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
RPS27AP62979 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC21.23■□□□□ 0.99
RPS27AP62979 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.23■□□□□ 0.99
RPS27AP62979 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RPS27AP62979 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RPS27AP62979 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
RPS27AP62979 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC21.22■□□□□ 0.99
RPS27AP62979 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPS27AP62979 LTK-203ENST00000453182 2412 ntTSL 2 BASIC21.22■□□□□ 0.99
RPS27AP62979 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
RPS27AP62979 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RPS27AP62979 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS27AP62979 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RPS27AP62979 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.22■□□□□ 0.99
RPS27AP62979 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC21.21■□□□□ 0.99
RPS27AP62979 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
RPS27AP62979 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.21■□□□□ 0.99
RPS27AP62979 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RPS27AP62979 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.21■□□□□ 0.99
RPS27AP62979 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC21.21■□□□□ 0.99
RPS27AP62979 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.21■□□□□ 0.99
RPS27AP62979 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPS27AP62979 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.2■□□□□ 0.98
RPS27AP62979 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RPS27AP62979 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.2■□□□□ 0.98
RPS27AP62979 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
RPS27AP62979 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RPS27AP62979 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.19■□□□□ 0.98
RPS27AP62979 MIR3665-201ENST00000578708 105 ntBASIC21.19■□□□□ 0.98
RPS27AP62979 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RPS27AP62979 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.19■□□□□ 0.98
RPS27AP62979 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.19■□□□□ 0.98
RPS27AP62979 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC21.18■□□□□ 0.98
RPS27AP62979 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.18■□□□□ 0.98
RPS27AP62979 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPS27AP62979 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPS27AP62979 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.18■□□□□ 0.98
RPS27AP62979 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
RPS27AP62979 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC21.18■□□□□ 0.98
RPS27AP62979 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
RPS27AP62979 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.17■□□□□ 0.98
RPS27AP62979 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.17■□□□□ 0.98
RPS27AP62979 AC093323.1-202ENST00000635031 2045 ntBASIC21.17■□□□□ 0.98
RPS27AP62979 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
RPS27AP62979 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms