Protein–RNA interactions for Protein: P60228

EIF3E, Eukaryotic translation initiation factor 3 subunit E, humanhuman

Known RBP Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3EP60228 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.7■■□□□ 1.7
EIF3EP60228 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.7■■□□□ 1.7
EIF3EP60228 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
EIF3EP60228 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC25.7■■□□□ 1.7
EIF3EP60228 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC25.69■■□□□ 1.7
EIF3EP60228 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
EIF3EP60228 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.69■■□□□ 1.7
EIF3EP60228 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
EIF3EP60228 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
EIF3EP60228 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC25.69■■□□□ 1.7
EIF3EP60228 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC25.69■■□□□ 1.7
EIF3EP60228 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC25.69■■□□□ 1.7
EIF3EP60228 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
EIF3EP60228 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
EIF3EP60228 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
EIF3EP60228 AL449106.1-201ENST00000608517 1980 ntBASIC25.67■■□□□ 1.7
EIF3EP60228 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
EIF3EP60228 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
EIF3EP60228 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
EIF3EP60228 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC25.66■■□□□ 1.7
EIF3EP60228 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC25.66■■□□□ 1.7
EIF3EP60228 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.66■■□□□ 1.7
EIF3EP60228 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.66■■□□□ 1.7
EIF3EP60228 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC25.66■■□□□ 1.7
EIF3EP60228 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
EIF3EP60228 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
EIF3EP60228 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC25.66■■□□□ 1.7
EIF3EP60228 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
EIF3EP60228 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.65■■□□□ 1.7
EIF3EP60228 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.65■■□□□ 1.7
EIF3EP60228 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
EIF3EP60228 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
EIF3EP60228 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
EIF3EP60228 LINC01971-201ENST00000617888 1048 ntBASIC25.64■■□□□ 1.7
EIF3EP60228 SHF-207ENST00000560540 2062 ntTSL 5 BASIC25.64■■□□□ 1.69
EIF3EP60228 RPS2-210ENST00000530225 765 ntTSL 2 BASIC25.63■■□□□ 1.69
EIF3EP60228 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC25.63■■□□□ 1.69
EIF3EP60228 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC25.63■■□□□ 1.69
EIF3EP60228 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.62■■□□□ 1.69
EIF3EP60228 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
EIF3EP60228 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
EIF3EP60228 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
EIF3EP60228 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
EIF3EP60228 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC25.6■■□□□ 1.69
EIF3EP60228 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC25.6■■□□□ 1.69
EIF3EP60228 AP004609.3-201ENST00000610705 1884 ntBASIC25.6■■□□□ 1.69
EIF3EP60228 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
EIF3EP60228 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
EIF3EP60228 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC25.58■■□□□ 1.69
EIF3EP60228 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC25.58■■□□□ 1.69
EIF3EP60228 WHAMMP3-201ENST00000611636 1609 ntBASIC25.58■■□□□ 1.69
EIF3EP60228 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
EIF3EP60228 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.57■■□□□ 1.68
EIF3EP60228 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
EIF3EP60228 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.57■■□□□ 1.68
EIF3EP60228 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC25.57■■□□□ 1.68
EIF3EP60228 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC25.56■■□□□ 1.68
EIF3EP60228 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF3EP60228 DUX4L13-201ENST00000554103 1267 ntBASIC25.56■■□□□ 1.68
EIF3EP60228 DUX4L15-201ENST00000611059 1267 ntBASIC25.56■■□□□ 1.68
EIF3EP60228 DUX4L23-201ENST00000615195 1269 ntBASIC25.56■■□□□ 1.68
EIF3EP60228 DUX4L24-201ENST00000617576 1269 ntBASIC25.56■■□□□ 1.68
EIF3EP60228 DUX4L22-201ENST00000618238 1269 ntBASIC25.56■■□□□ 1.68
EIF3EP60228 DUX4L20-201ENST00000619712 1269 ntBASIC25.56■■□□□ 1.68
EIF3EP60228 DUX4L21-201ENST00000622058 1269 ntBASIC25.56■■□□□ 1.68
EIF3EP60228 DUX4L10-201ENST00000622460 1267 ntBASIC25.56■■□□□ 1.68
EIF3EP60228 DUX4L25-201ENST00000624915 1269 ntBASIC25.56■■□□□ 1.68
EIF3EP60228 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
EIF3EP60228 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC25.55■■□□□ 1.68
EIF3EP60228 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
EIF3EP60228 AC091060.1-201ENST00000623524 1766 ntBASIC25.54■■□□□ 1.68
EIF3EP60228 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
EIF3EP60228 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
EIF3EP60228 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
EIF3EP60228 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
EIF3EP60228 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
EIF3EP60228 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
EIF3EP60228 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC25.53■■□□□ 1.68
EIF3EP60228 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC25.53■■□□□ 1.68
EIF3EP60228 MLEC-202ENST00000412616 841 ntTSL 3 BASIC25.53■■□□□ 1.68
EIF3EP60228 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC25.53■■□□□ 1.68
EIF3EP60228 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC25.53■■□□□ 1.68
EIF3EP60228 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
EIF3EP60228 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC25.52■■□□□ 1.68
EIF3EP60228 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC25.52■■□□□ 1.68
EIF3EP60228 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.52■■□□□ 1.68
EIF3EP60228 DUX4L11-201ENST00000611504 1267 ntBASIC25.52■■□□□ 1.68
EIF3EP60228 DUX4L12-201ENST00000614593 1267 ntBASIC25.52■■□□□ 1.68
EIF3EP60228 DUX4L14-201ENST00000621227 1267 ntBASIC25.52■■□□□ 1.68
EIF3EP60228 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.52■■□□□ 1.68
EIF3EP60228 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.51■■□□□ 1.67
EIF3EP60228 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
EIF3EP60228 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
EIF3EP60228 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
EIF3EP60228 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC25.5■■□□□ 1.67
EIF3EP60228 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
EIF3EP60228 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
EIF3EP60228 AC142472.1-201ENST00000612013 1741 ntBASIC25.49■■□□□ 1.67
EIF3EP60228 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
EIF3EP60228 ZNRF2P2-203ENST00000454624 420 ntBASIC25.48■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms