Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
SLC6A12P48065 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SLC6A12P48065 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
SLC6A12P48065 HES6-205ENST00000409356 528 ntTSL 2 BASIC24.21■■□□□ 1.47
SLC6A12P48065 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.21■■□□□ 1.47
SLC6A12P48065 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC24.21■■□□□ 1.47
SLC6A12P48065 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
SLC6A12P48065 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.47
SLC6A12P48065 CR559946.2-201ENST00000623684 991 ntBASIC24.2■■□□□ 1.46
SLC6A12P48065 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC24.19■■□□□ 1.46
SLC6A12P48065 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
SLC6A12P48065 AC008813.1-201ENST00000536597 885 ntBASIC24.19■■□□□ 1.46
SLC6A12P48065 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC24.19■■□□□ 1.46
SLC6A12P48065 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
SLC6A12P48065 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC24.19■■□□□ 1.46
SLC6A12P48065 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.18■■□□□ 1.46
SLC6A12P48065 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
SLC6A12P48065 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
SLC6A12P48065 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
SLC6A12P48065 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.18■■□□□ 1.46
SLC6A12P48065 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.18■■□□□ 1.46
SLC6A12P48065 AL449106.1-201ENST00000608517 1980 ntBASIC24.17■■□□□ 1.46
SLC6A12P48065 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC6A12P48065 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
SLC6A12P48065 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC6A12P48065 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
SLC6A12P48065 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.17■■□□□ 1.46
SLC6A12P48065 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC6A12P48065 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC24.16■■□□□ 1.46
SLC6A12P48065 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
SLC6A12P48065 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC24.16■■□□□ 1.46
SLC6A12P48065 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.15■■□□□ 1.46
SLC6A12P48065 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
SLC6A12P48065 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.15■■□□□ 1.46
SLC6A12P48065 MACF1-219ENST00000484793 834 ntTSL 2 BASIC24.15■■□□□ 1.46
SLC6A12P48065 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SLC6A12P48065 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.46
SLC6A12P48065 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC24.14■■□□□ 1.46
SLC6A12P48065 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.14■■□□□ 1.45
SLC6A12P48065 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
SLC6A12P48065 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.14■■□□□ 1.45
SLC6A12P48065 AC148477.6-201ENST00000623746 465 ntBASIC24.14■■□□□ 1.45
SLC6A12P48065 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC24.14■■□□□ 1.45
SLC6A12P48065 WHAMMP3-201ENST00000611636 1609 ntBASIC24.13■■□□□ 1.45
SLC6A12P48065 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.13■■□□□ 1.45
SLC6A12P48065 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC6A12P48065 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC24.13■■□□□ 1.45
SLC6A12P48065 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC24.13■■□□□ 1.45
SLC6A12P48065 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC6A12P48065 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC24.13■■□□□ 1.45
SLC6A12P48065 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
SLC6A12P48065 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC6A12P48065 HLA-V-202ENST00000446817 847 ntBASIC24.12■■□□□ 1.45
SLC6A12P48065 MIR3648-2-201ENST00000581792 180 ntBASIC24.12■■□□□ 1.45
SLC6A12P48065 MIR3648-1-201ENST00000615959 180 ntBASIC24.12■■□□□ 1.45
SLC6A12P48065 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
SLC6A12P48065 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.11■■□□□ 1.45
SLC6A12P48065 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.11■■□□□ 1.45
SLC6A12P48065 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.11■■□□□ 1.45
SLC6A12P48065 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC24.11■■□□□ 1.45
SLC6A12P48065 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
SLC6A12P48065 MIR219A2-201ENST00000608502 1504 ntBASIC24.1■■□□□ 1.45
SLC6A12P48065 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.1■■□□□ 1.45
SLC6A12P48065 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
SLC6A12P48065 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
SLC6A12P48065 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
SLC6A12P48065 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC24.09■■□□□ 1.45
SLC6A12P48065 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC24.09■■□□□ 1.45
SLC6A12P48065 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
SLC6A12P48065 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
SLC6A12P48065 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.08■■□□□ 1.45
SLC6A12P48065 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SLC6A12P48065 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
SLC6A12P48065 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
SLC6A12P48065 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC24.07■■□□□ 1.44
SLC6A12P48065 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A12P48065 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC24.07■■□□□ 1.44
SLC6A12P48065 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.07■■□□□ 1.44
SLC6A12P48065 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
SLC6A12P48065 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC24.07■■□□□ 1.44
SLC6A12P48065 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.07■■□□□ 1.44
SLC6A12P48065 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
SLC6A12P48065 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SLC6A12P48065 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
SLC6A12P48065 MIR7108-201ENST00000614319 87 ntBASIC24.05■■□□□ 1.44
SLC6A12P48065 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
SLC6A12P48065 AP004609.3-201ENST00000610705 1884 ntBASIC24.04■■□□□ 1.44
SLC6A12P48065 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
SLC6A12P48065 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.04■■□□□ 1.44
SLC6A12P48065 AC016575.1-201ENST00000607026 382 ntBASIC24.04■■□□□ 1.44
SLC6A12P48065 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SLC6A12P48065 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SLC6A12P48065 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
SLC6A12P48065 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
SLC6A12P48065 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.03■■□□□ 1.44
SLC6A12P48065 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC24.03■■□□□ 1.44
SLC6A12P48065 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A12P48065 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A12P48065 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
SLC6A12P48065 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms