Protein–RNA interactions for Protein: P31040

SDHA, Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP31040 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SDHAP31040 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SDHAP31040 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.31■■□□□ 1.16
SDHAP31040 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
SDHAP31040 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
SDHAP31040 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SDHAP31040 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
SDHAP31040 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
SDHAP31040 AL449106.1-201ENST00000608517 1980 ntBASIC22.3■■□□□ 1.16
SDHAP31040 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.3■■□□□ 1.16
SDHAP31040 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
SDHAP31040 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC22.29■■□□□ 1.16
SDHAP31040 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.29■■□□□ 1.16
SDHAP31040 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
SDHAP31040 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
SDHAP31040 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SDHAP31040 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SDHAP31040 RPS2P35-201ENST00000443417 897 ntBASIC22.28■■□□□ 1.16
SDHAP31040 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
SDHAP31040 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.27■■□□□ 1.16
SDHAP31040 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.27■■□□□ 1.16
SDHAP31040 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.27■■□□□ 1.16
SDHAP31040 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.27■■□□□ 1.16
SDHAP31040 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
SDHAP31040 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC22.27■■□□□ 1.16
SDHAP31040 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.27■■□□□ 1.15
SDHAP31040 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.27■■□□□ 1.15
SDHAP31040 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
SDHAP31040 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.26■■□□□ 1.15
SDHAP31040 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.25■■□□□ 1.15
SDHAP31040 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.25■■□□□ 1.15
SDHAP31040 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.25■■□□□ 1.15
SDHAP31040 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
SDHAP31040 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
SDHAP31040 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
SDHAP31040 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.24■■□□□ 1.15
SDHAP31040 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.24■■□□□ 1.15
SDHAP31040 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
SDHAP31040 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC22.24■■□□□ 1.15
SDHAP31040 AP004609.3-201ENST00000610705 1884 ntBASIC22.24■■□□□ 1.15
SDHAP31040 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SDHAP31040 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
SDHAP31040 LINC01971-201ENST00000617888 1048 ntBASIC22.23■■□□□ 1.15
SDHAP31040 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
SDHAP31040 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
SDHAP31040 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
SDHAP31040 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SDHAP31040 WHAMMP3-201ENST00000611636 1609 ntBASIC22.22■■□□□ 1.15
SDHAP31040 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
SDHAP31040 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
SDHAP31040 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
SDHAP31040 AC091060.1-201ENST00000623524 1766 ntBASIC22.21■■□□□ 1.15
SDHAP31040 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
SDHAP31040 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.21■■□□□ 1.15
SDHAP31040 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC22.21■■□□□ 1.15
SDHAP31040 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.2■■□□□ 1.15
SDHAP31040 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SDHAP31040 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.18■■□□□ 1.14
SDHAP31040 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
SDHAP31040 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.17■■□□□ 1.14
SDHAP31040 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SDHAP31040 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SDHAP31040 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SDHAP31040 AC142472.1-201ENST00000612013 1741 ntBASIC22.17■■□□□ 1.14
SDHAP31040 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
SDHAP31040 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SDHAP31040 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SDHAP31040 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SDHAP31040 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SDHAP31040 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.15■■□□□ 1.14
SDHAP31040 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.15■■□□□ 1.14
SDHAP31040 DUX4L13-201ENST00000554103 1267 ntBASIC22.15■■□□□ 1.14
SDHAP31040 DUX4L15-201ENST00000611059 1267 ntBASIC22.15■■□□□ 1.14
SDHAP31040 DUX4L23-201ENST00000615195 1269 ntBASIC22.15■■□□□ 1.14
SDHAP31040 DUX4L24-201ENST00000617576 1269 ntBASIC22.15■■□□□ 1.14
SDHAP31040 DUX4L22-201ENST00000618238 1269 ntBASIC22.15■■□□□ 1.14
SDHAP31040 DUX4L20-201ENST00000619712 1269 ntBASIC22.15■■□□□ 1.14
SDHAP31040 DUX4L21-201ENST00000622058 1269 ntBASIC22.15■■□□□ 1.14
SDHAP31040 DUX4L10-201ENST00000622460 1267 ntBASIC22.15■■□□□ 1.14
SDHAP31040 DUX4L25-201ENST00000624915 1269 ntBASIC22.15■■□□□ 1.14
SDHAP31040 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SDHAP31040 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC22.15■■□□□ 1.14
SDHAP31040 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SDHAP31040 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SDHAP31040 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC22.14■■□□□ 1.13
SDHAP31040 AC145676.1-201ENST00000514988 2004 ntBASIC22.14■■□□□ 1.13
SDHAP31040 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SDHAP31040 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SDHAP31040 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
SDHAP31040 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SDHAP31040 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
SDHAP31040 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SDHAP31040 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
SDHAP31040 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SDHAP31040 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC22.13■■□□□ 1.13
SDHAP31040 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
SDHAP31040 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
SDHAP31040 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
SDHAP31040 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
SDHAP31040 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms