Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.26■■□□□ 1.63
RETP07949 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC25.26■■□□□ 1.63
RETP07949 REST-210ENST00000638187 1334 ntTSL 5 BASIC25.26■■□□□ 1.63
RETP07949 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
RETP07949 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC25.25■■□□□ 1.63
RETP07949 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC25.25■■□□□ 1.63
RETP07949 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC25.25■■□□□ 1.63
RETP07949 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC25.25■■□□□ 1.63
RETP07949 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC25.25■■□□□ 1.63
RETP07949 AC009831.1-201ENST00000580420 1582 ntBASIC25.24■■□□□ 1.63
RETP07949 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC25.24■■□□□ 1.63
RETP07949 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
RETP07949 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC25.24■■□□□ 1.63
RETP07949 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC25.23■■□□□ 1.63
RETP07949 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
RETP07949 AL157400.5-201ENST00000507624 621 ntBASIC25.23■■□□□ 1.63
RETP07949 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
RETP07949 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RETP07949 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RETP07949 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
RETP07949 PEX7-203ENST00000541292 945 ntTSL 5 BASIC25.22■■□□□ 1.63
RETP07949 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC25.21■■□□□ 1.63
RETP07949 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
RETP07949 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RETP07949 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC25.21■■□□□ 1.63
RETP07949 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
RETP07949 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.2■■□□□ 1.63
RETP07949 MED25-210ENST00000612854 801 ntTSL 5 BASIC25.2■■□□□ 1.62
RETP07949 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC25.2■■□□□ 1.62
RETP07949 MED25-214ENST00000622402 642 ntTSL 5 BASIC25.2■■□□□ 1.62
RETP07949 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RETP07949 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.19■■□□□ 1.62
RETP07949 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RETP07949 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RETP07949 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
RETP07949 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RETP07949 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC25.18■■□□□ 1.62
RETP07949 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
RETP07949 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC25.18■■□□□ 1.62
RETP07949 AC131212.1-201ENST00000613771 668 ntBASIC25.18■■□□□ 1.62
RETP07949 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC25.18■■□□□ 1.62
RETP07949 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC25.17■■□□□ 1.62
RETP07949 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC25.16■■□□□ 1.62
RETP07949 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
RETP07949 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
RETP07949 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC25.16■■□□□ 1.62
RETP07949 BHLHE23-202ENST00000612929 1109 ntBASIC25.16■■□□□ 1.62
RETP07949 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
RETP07949 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC25.16■■□□□ 1.62
RETP07949 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
RETP07949 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
RETP07949 AC074183.2-201ENST00000623112 922 ntBASIC25.15■■□□□ 1.62
RETP07949 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RETP07949 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC25.14■■□□□ 1.62
RETP07949 AC009299.2-201ENST00000482477 511 ntBASIC25.14■■□□□ 1.62
RETP07949 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
RETP07949 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
RETP07949 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.61
RETP07949 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.61
RETP07949 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC25.13■■□□□ 1.61
RETP07949 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC25.13■■□□□ 1.61
RETP07949 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC25.13■■□□□ 1.61
RETP07949 RP9P-202ENST00000450133 1212 ntBASIC25.13■■□□□ 1.61
RETP07949 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC25.13■■□□□ 1.61
RETP07949 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
RETP07949 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
RETP07949 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.12■■□□□ 1.61
RETP07949 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
RETP07949 HES6-204ENST00000409182 863 ntTSL 2 BASIC25.11■■□□□ 1.61
RETP07949 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC25.11■■□□□ 1.61
RETP07949 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
RETP07949 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETP07949 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RETP07949 AC010980.1-201ENST00000587192 1142 ntBASIC25.1■■□□□ 1.61
RETP07949 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETP07949 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
RETP07949 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC25.1■■□□□ 1.61
RETP07949 SMPD5-203ENST00000639008 1464 ntBASIC25.09■■□□□ 1.61
RETP07949 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC25.09■■□□□ 1.61
RETP07949 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RETP07949 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RETP07949 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RETP07949 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
RETP07949 THA1P-201ENST00000590384 1145 ntBASIC25.09■■□□□ 1.61
RETP07949 AC026202.3-201ENST00000600805 1127 ntBASIC25.09■■□□□ 1.61
RETP07949 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
RETP07949 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC25.09■■□□□ 1.61
RETP07949 KRT8P33-201ENST00000508125 1423 ntBASIC25.09■■□□□ 1.61
RETP07949 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
RETP07949 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RETP07949 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.08■■□□□ 1.61
RETP07949 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
RETP07949 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC25.08■■□□□ 1.6
RETP07949 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC25.08■■□□□ 1.6
RETP07949 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RETP07949 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
RETP07949 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC25.07■■□□□ 1.6
RETP07949 DUX4L9-201ENST00000449051 1259 ntBASIC25.07■■□□□ 1.6
RETP07949 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
RETP07949 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms