Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
PCDH7O60245 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC23.79■■□□□ 1.4
PCDH7O60245 RPS2-210ENST00000530225 765 ntTSL 2 BASIC23.79■■□□□ 1.4
PCDH7O60245 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC23.79■■□□□ 1.4
PCDH7O60245 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH7O60245 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH7O60245 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC23.78■■□□□ 1.4
PCDH7O60245 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
PCDH7O60245 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
PCDH7O60245 DUX4L13-201ENST00000554103 1267 ntBASIC23.77■■□□□ 1.4
PCDH7O60245 DUX4L15-201ENST00000611059 1267 ntBASIC23.77■■□□□ 1.4
PCDH7O60245 DUX4L23-201ENST00000615195 1269 ntBASIC23.77■■□□□ 1.4
PCDH7O60245 DUX4L24-201ENST00000617576 1269 ntBASIC23.77■■□□□ 1.4
PCDH7O60245 DUX4L22-201ENST00000618238 1269 ntBASIC23.77■■□□□ 1.4
PCDH7O60245 DUX4L20-201ENST00000619712 1269 ntBASIC23.77■■□□□ 1.4
PCDH7O60245 DUX4L21-201ENST00000622058 1269 ntBASIC23.77■■□□□ 1.4
PCDH7O60245 DUX4L10-201ENST00000622460 1267 ntBASIC23.77■■□□□ 1.4
PCDH7O60245 DUX4L25-201ENST00000624915 1269 ntBASIC23.77■■□□□ 1.4
PCDH7O60245 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.76■■□□□ 1.39
PCDH7O60245 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH7O60245 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH7O60245 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.76■■□□□ 1.39
PCDH7O60245 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
PCDH7O60245 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
PCDH7O60245 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH7O60245 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH7O60245 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDH7O60245 DUX4L11-201ENST00000611504 1267 ntBASIC23.75■■□□□ 1.39
PCDH7O60245 DUX4L12-201ENST00000614593 1267 ntBASIC23.75■■□□□ 1.39
PCDH7O60245 DUX4L14-201ENST00000621227 1267 ntBASIC23.75■■□□□ 1.39
PCDH7O60245 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.75■■□□□ 1.39
PCDH7O60245 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
PCDH7O60245 ZNRF2P2-203ENST00000454624 420 ntBASIC23.74■■□□□ 1.39
PCDH7O60245 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDH7O60245 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDH7O60245 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.74■■□□□ 1.39
PCDH7O60245 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH7O60245 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH7O60245 AL449106.1-201ENST00000608517 1980 ntBASIC23.73■■□□□ 1.39
PCDH7O60245 CREM-210ENST00000374721 2020 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDH7O60245 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH7O60245 CHST11-202ENST00000546689 756 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDH7O60245 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC23.73■■□□□ 1.39
PCDH7O60245 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH7O60245 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC23.73■■□□□ 1.39
PCDH7O60245 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH7O60245 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PCDH7O60245 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
PCDH7O60245 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
PCDH7O60245 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
PCDH7O60245 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH7O60245 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
PCDH7O60245 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC23.7■■□□□ 1.38
PCDH7O60245 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH7O60245 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH7O60245 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH7O60245 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH7O60245 WHAMMP3-201ENST00000611636 1609 ntBASIC23.68■■□□□ 1.38
PCDH7O60245 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.68■■□□□ 1.38
PCDH7O60245 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH7O60245 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDH7O60245 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH7O60245 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH7O60245 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC23.66■■□□□ 1.38
PCDH7O60245 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH7O60245 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH7O60245 AP004609.3-201ENST00000610705 1884 ntBASIC23.65■■□□□ 1.38
PCDH7O60245 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH7O60245 ABHD17AP4-201ENST00000411545 909 ntBASIC23.65■■□□□ 1.38
PCDH7O60245 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH7O60245 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC23.65■■□□□ 1.38
PCDH7O60245 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH7O60245 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH7O60245 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH7O60245 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC23.64■■□□□ 1.38
PCDH7O60245 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH7O60245 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH7O60245 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH7O60245 AC008813.1-201ENST00000536597 885 ntBASIC23.64■■□□□ 1.37
PCDH7O60245 RNF166-209ENST00000567844 633 ntTSL 5 BASIC23.64■■□□□ 1.37
PCDH7O60245 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH7O60245 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH7O60245 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH7O60245 HES6-205ENST00000409356 528 ntTSL 2 BASIC23.63■■□□□ 1.37
PCDH7O60245 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC23.62■■□□□ 1.37
PCDH7O60245 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH7O60245 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.62■■□□□ 1.37
PCDH7O60245 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH7O60245 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PCDH7O60245 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH7O60245 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH7O60245 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC23.61■■□□□ 1.37
PCDH7O60245 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDH7O60245 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC23.61■■□□□ 1.37
PCDH7O60245 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH7O60245 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.61■■□□□ 1.37
PCDH7O60245 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH7O60245 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.6■■□□□ 1.37
PCDH7O60245 AGPS-202ENST00000409888 815 ntTSL 4 BASIC23.6■■□□□ 1.37
PCDH7O60245 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC23.6■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 108.3 ms