Protein–RNA interactions for Protein: O15270

SPTLC2, Serine palmitoyltransferase 2, humanhuman

Predictions only

Length 562 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2O15270 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC28.44■■■□□ 2.14
SPTLC2O15270 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC28.43■■■□□ 2.14
SPTLC2O15270 AL449106.1-201ENST00000608517 1980 ntBASIC28.43■■■□□ 2.14
SPTLC2O15270 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC28.43■■■□□ 2.14
SPTLC2O15270 RPS2P35-201ENST00000443417 897 ntBASIC28.43■■■□□ 2.14
SPTLC2O15270 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC28.43■■■□□ 2.14
SPTLC2O15270 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SPTLC2O15270 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SPTLC2O15270 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC28.42■■■□□ 2.14
SPTLC2O15270 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPTLC2O15270 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
SPTLC2O15270 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.4■■■□□ 2.14
SPTLC2O15270 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC28.4■■■□□ 2.14
SPTLC2O15270 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC28.4■■■□□ 2.14
SPTLC2O15270 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.14
SPTLC2O15270 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.39■■■□□ 2.14
SPTLC2O15270 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC28.39■■■□□ 2.13
SPTLC2O15270 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC28.39■■■□□ 2.13
SPTLC2O15270 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SPTLC2O15270 HGH1-207ENST00000628266 258 ntTSL 5 BASIC28.38■■■□□ 2.13
SPTLC2O15270 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
SPTLC2O15270 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC28.38■■■□□ 2.13
SPTLC2O15270 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.37■■■□□ 2.13
SPTLC2O15270 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.37■■■□□ 2.13
SPTLC2O15270 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC28.37■■■□□ 2.13
SPTLC2O15270 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
SPTLC2O15270 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.36■■■□□ 2.13
SPTLC2O15270 AC091060.1-201ENST00000623524 1766 ntBASIC28.36■■■□□ 2.13
SPTLC2O15270 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SPTLC2O15270 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
SPTLC2O15270 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC28.34■■■□□ 2.13
SPTLC2O15270 AP004609.3-201ENST00000610705 1884 ntBASIC28.34■■■□□ 2.13
SPTLC2O15270 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC28.34■■■□□ 2.13
SPTLC2O15270 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC28.34■■■□□ 2.13
SPTLC2O15270 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
SPTLC2O15270 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC28.33■■■□□ 2.13
SPTLC2O15270 RPS2-210ENST00000530225 765 ntTSL 2 BASIC28.33■■■□□ 2.13
SPTLC2O15270 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC28.33■■■□□ 2.13
SPTLC2O15270 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
SPTLC2O15270 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC28.31■■■□□ 2.12
SPTLC2O15270 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
SPTLC2O15270 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC28.31■■■□□ 2.12
SPTLC2O15270 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC28.3■■■□□ 2.12
SPTLC2O15270 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
SPTLC2O15270 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC28.3■■■□□ 2.12
SPTLC2O15270 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
SPTLC2O15270 WHAMMP3-201ENST00000611636 1609 ntBASIC28.29■■■□□ 2.12
SPTLC2O15270 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC28.29■■■□□ 2.12
SPTLC2O15270 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC28.29■■■□□ 2.12
SPTLC2O15270 CHML-204ENST00000638121 920 ntTSL 2 BASIC28.29■■■□□ 2.12
SPTLC2O15270 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
SPTLC2O15270 LINC01971-201ENST00000617888 1048 ntBASIC28.28■■■□□ 2.12
SPTLC2O15270 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
SPTLC2O15270 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC28.27■■■□□ 2.12
SPTLC2O15270 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC28.26■■■□□ 2.12
SPTLC2O15270 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC28.26■■■□□ 2.11
SPTLC2O15270 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC28.26■■■□□ 2.11
SPTLC2O15270 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
SPTLC2O15270 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC28.25■■■□□ 2.11
SPTLC2O15270 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
SPTLC2O15270 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC28.25■■■□□ 2.11
SPTLC2O15270 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
SPTLC2O15270 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SPTLC2O15270 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
SPTLC2O15270 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
SPTLC2O15270 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC28.23■■■□□ 2.11
SPTLC2O15270 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
SPTLC2O15270 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
SPTLC2O15270 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC28.22■■■□□ 2.11
SPTLC2O15270 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.22■■■□□ 2.11
SPTLC2O15270 AC142472.1-201ENST00000612013 1741 ntBASIC28.22■■■□□ 2.11
SPTLC2O15270 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SPTLC2O15270 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC28.21■■■□□ 2.11
SPTLC2O15270 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC28.21■■■□□ 2.11
SPTLC2O15270 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.21■■■□□ 2.11
SPTLC2O15270 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SPTLC2O15270 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC28.21■■■□□ 2.11
SPTLC2O15270 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC28.21■■■□□ 2.11
SPTLC2O15270 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
SPTLC2O15270 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC28.2■■■□□ 2.11
SPTLC2O15270 AC145676.1-201ENST00000514988 2004 ntBASIC28.2■■■□□ 2.11
SPTLC2O15270 DUX4L13-201ENST00000554103 1267 ntBASIC28.2■■■□□ 2.1
SPTLC2O15270 DUX4L15-201ENST00000611059 1267 ntBASIC28.2■■■□□ 2.1
SPTLC2O15270 DUX4L23-201ENST00000615195 1269 ntBASIC28.2■■■□□ 2.1
SPTLC2O15270 DUX4L24-201ENST00000617576 1269 ntBASIC28.2■■■□□ 2.1
SPTLC2O15270 DUX4L22-201ENST00000618238 1269 ntBASIC28.2■■■□□ 2.1
SPTLC2O15270 DUX4L20-201ENST00000619712 1269 ntBASIC28.2■■■□□ 2.1
SPTLC2O15270 DUX4L21-201ENST00000622058 1269 ntBASIC28.2■■■□□ 2.1
SPTLC2O15270 DUX4L10-201ENST00000622460 1267 ntBASIC28.2■■■□□ 2.1
SPTLC2O15270 DUX4L25-201ENST00000624915 1269 ntBASIC28.2■■■□□ 2.1
SPTLC2O15270 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC28.2■■■□□ 2.1
SPTLC2O15270 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SPTLC2O15270 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SPTLC2O15270 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
SPTLC2O15270 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
SPTLC2O15270 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC28.19■■■□□ 2.1
SPTLC2O15270 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
SPTLC2O15270 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC28.18■■■□□ 2.1
SPTLC2O15270 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC28.17■■■□□ 2.1
SPTLC2O15270 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms