Protein–RNA interactions for Protein: O14917

PCDH17, Protocadherin-17, humanhuman

Predictions only

Length 1,159 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH17O14917 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH17O14917 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.74■■□□□ 1.39
PCDH17O14917 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH17O14917 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH17O14917 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PCDH17O14917 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC23.74■■□□□ 1.39
PCDH17O14917 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
PCDH17O14917 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
PCDH17O14917 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH17O14917 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH17O14917 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.73■■□□□ 1.39
PCDH17O14917 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC23.73■■□□□ 1.39
PCDH17O14917 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
PCDH17O14917 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH17O14917 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH17O14917 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
PCDH17O14917 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
PCDH17O14917 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.71■■□□□ 1.39
PCDH17O14917 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC23.71■■□□□ 1.39
PCDH17O14917 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC23.71■■□□□ 1.39
PCDH17O14917 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
PCDH17O14917 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
PCDH17O14917 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH17O14917 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
PCDH17O14917 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC23.69■■□□□ 1.38
PCDH17O14917 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDH17O14917 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
PCDH17O14917 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC23.69■■□□□ 1.38
PCDH17O14917 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
PCDH17O14917 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC23.69■■□□□ 1.38
PCDH17O14917 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
PCDH17O14917 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH17O14917 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH17O14917 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH17O14917 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH17O14917 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC23.68■■□□□ 1.38
PCDH17O14917 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDH17O14917 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
PCDH17O14917 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH17O14917 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDH17O14917 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
PCDH17O14917 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
PCDH17O14917 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
PCDH17O14917 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.68■■□□□ 1.38
PCDH17O14917 BX255925.1-201ENST00000566954 1854 ntBASIC23.67■■□□□ 1.38
PCDH17O14917 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH17O14917 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
PCDH17O14917 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH17O14917 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH17O14917 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
PCDH17O14917 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
PCDH17O14917 GPX1-201ENST00000419349 1106 ntBASIC23.66■■□□□ 1.38
PCDH17O14917 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH17O14917 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
PCDH17O14917 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.66■■□□□ 1.38
PCDH17O14917 PROC-203ENST00000409048 1586 ntTSL 5 BASIC23.65■■□□□ 1.38
PCDH17O14917 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
PCDH17O14917 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH17O14917 MIR219A2-201ENST00000608502 1504 ntBASIC23.65■■□□□ 1.38
PCDH17O14917 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH17O14917 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC23.65■■□□□ 1.38
PCDH17O14917 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
PCDH17O14917 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.65■■□□□ 1.38
PCDH17O14917 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH17O14917 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
PCDH17O14917 AC126177.7-201ENST00000547904 679 ntBASIC23.64■■□□□ 1.37
PCDH17O14917 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC23.64■■□□□ 1.37
PCDH17O14917 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH17O14917 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
PCDH17O14917 RNF126P1-201ENST00000567452 1320 ntBASIC23.63■■□□□ 1.37
PCDH17O14917 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH17O14917 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH17O14917 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.63■■□□□ 1.37
PCDH17O14917 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC23.63■■□□□ 1.37
PCDH17O14917 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
PCDH17O14917 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC23.63■■□□□ 1.37
PCDH17O14917 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH17O14917 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC23.62■■□□□ 1.37
PCDH17O14917 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC23.62■■□□□ 1.37
PCDH17O14917 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH17O14917 AC022413.1-201ENST00000624602 984 ntBASIC23.62■■□□□ 1.37
PCDH17O14917 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH17O14917 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
PCDH17O14917 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC23.62■■□□□ 1.37
PCDH17O14917 AC100797.4-201ENST00000631653 1827 ntBASIC23.61■■□□□ 1.37
PCDH17O14917 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH17O14917 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC23.61■■□□□ 1.37
PCDH17O14917 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.61■■□□□ 1.37
PCDH17O14917 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH17O14917 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH17O14917 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH17O14917 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.6■■□□□ 1.37
PCDH17O14917 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
PCDH17O14917 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC23.59■■□□□ 1.37
PCDH17O14917 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH17O14917 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC23.59■■□□□ 1.37
PCDH17O14917 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
PCDH17O14917 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
PCDH17O14917 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
PCDH17O14917 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 14.5 ms