Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 AL359258.2-201ENST00000564063 1566 ntBASIC24.63■■□□□ 1.53
CDX4O14627 THA1P-201ENST00000590384 1145 ntBASIC24.62■■□□□ 1.53
CDX4O14627 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC24.62■■□□□ 1.53
CDX4O14627 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
CDX4O14627 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC24.61■■□□□ 1.53
CDX4O14627 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC24.61■■□□□ 1.53
CDX4O14627 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDX4O14627 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC24.61■■□□□ 1.53
CDX4O14627 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
CDX4O14627 BEX3-202ENST00000372634 753 ntTSL 2 BASIC24.6■■□□□ 1.53
CDX4O14627 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC24.6■■□□□ 1.53
CDX4O14627 RAP2CP1-202ENST00000605179 643 ntBASIC24.6■■□□□ 1.53
CDX4O14627 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC24.6■■□□□ 1.53
CDX4O14627 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC24.59■■□□□ 1.53
CDX4O14627 GUSBP5-201ENST00000418136 578 ntBASIC24.59■■□□□ 1.53
CDX4O14627 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDX4O14627 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC24.59■■□□□ 1.53
CDX4O14627 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
CDX4O14627 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC24.59■■□□□ 1.53
CDX4O14627 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
CDX4O14627 YBX1P4-201ENST00000392794 808 ntBASIC24.58■■□□□ 1.53
CDX4O14627 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC24.58■■□□□ 1.53
CDX4O14627 AC093536.1-201ENST00000569153 554 ntBASIC24.58■■□□□ 1.53
CDX4O14627 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC24.57■■□□□ 1.52
CDX4O14627 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDX4O14627 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC24.57■■□□□ 1.52
CDX4O14627 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC24.57■■□□□ 1.52
CDX4O14627 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC24.57■■□□□ 1.52
CDX4O14627 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.57■■□□□ 1.52
CDX4O14627 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDX4O14627 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CDX4O14627 OR2A1-AS1-204ENST00000470435 602 ntBASIC24.56■■□□□ 1.52
CDX4O14627 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC24.56■■□□□ 1.52
CDX4O14627 PVT1_1.1-201ENST00000615125 194 ntBASIC24.56■■□□□ 1.52
CDX4O14627 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDX4O14627 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
CDX4O14627 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC24.55■■□□□ 1.52
CDX4O14627 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDX4O14627 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC24.55■■□□□ 1.52
CDX4O14627 AC139795.1-202ENST00000500444 432 ntBASIC24.55■■□□□ 1.52
CDX4O14627 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
CDX4O14627 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC24.54■■□□□ 1.52
CDX4O14627 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC24.54■■□□□ 1.52
CDX4O14627 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC24.54■■□□□ 1.52
CDX4O14627 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC24.54■■□□□ 1.52
CDX4O14627 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDX4O14627 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC24.54■■□□□ 1.52
CDX4O14627 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC24.54■■□□□ 1.52
CDX4O14627 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC24.53■■□□□ 1.52
CDX4O14627 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.53■■□□□ 1.52
CDX4O14627 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC24.53■■□□□ 1.52
CDX4O14627 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC24.53■■□□□ 1.52
CDX4O14627 MIR6765-201ENST00000614092 87 ntBASIC24.53■■□□□ 1.52
CDX4O14627 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC24.53■■□□□ 1.52
CDX4O14627 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC24.53■■□□□ 1.52
CDX4O14627 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
CDX4O14627 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC24.52■■□□□ 1.52
CDX4O14627 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDX4O14627 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC24.52■■□□□ 1.52
CDX4O14627 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.52■■□□□ 1.52
CDX4O14627 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
CDX4O14627 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC24.51■■□□□ 1.51
CDX4O14627 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC24.51■■□□□ 1.51
CDX4O14627 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDX4O14627 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC24.5■■□□□ 1.51
CDX4O14627 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDX4O14627 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC24.5■■□□□ 1.51
CDX4O14627 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
CDX4O14627 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC24.5■■□□□ 1.51
CDX4O14627 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDX4O14627 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC24.49■■□□□ 1.51
CDX4O14627 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
CDX4O14627 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.48■■□□□ 1.51
CDX4O14627 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC24.48■■□□□ 1.51
CDX4O14627 MIR4508-201ENST00000584178 70 ntBASIC24.48■■□□□ 1.51
CDX4O14627 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
CDX4O14627 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC24.47■■□□□ 1.51
CDX4O14627 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC24.47■■□□□ 1.51
CDX4O14627 HYI-210ENST00000486909 905 ntTSL 5 BASIC24.47■■□□□ 1.51
CDX4O14627 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC24.47■■□□□ 1.51
CDX4O14627 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC24.47■■□□□ 1.51
CDX4O14627 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDX4O14627 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC24.46■■□□□ 1.51
CDX4O14627 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC24.46■■□□□ 1.51
CDX4O14627 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC24.46■■□□□ 1.51
CDX4O14627 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC24.46■■□□□ 1.51
CDX4O14627 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
CDX4O14627 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
CDX4O14627 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.45■■□□□ 1.5
CDX4O14627 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDX4O14627 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC24.45■■□□□ 1.5
CDX4O14627 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC24.45■■□□□ 1.5
CDX4O14627 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDX4O14627 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC24.45■■□□□ 1.5
CDX4O14627 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
CDX4O14627 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC24.45■■□□□ 1.5
CDX4O14627 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC24.45■■□□□ 1.5
CDX4O14627 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDX4O14627 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
CDX4O14627 PFN2-211ENST00000489155 636 ntTSL 4 BASIC24.44■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 17.1 ms