Protein–RNA interactions for Protein: A6NJ08

MBD3L5, Putative methyl-CpG-binding domain protein 3-like 5, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L5A6NJ08 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
MBD3L5A6NJ08 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
MBD3L5A6NJ08 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC22.19■■□□□ 1.14
MBD3L5A6NJ08 AC018358.1-201ENST00000631079 1402 ntBASIC22.19■■□□□ 1.14
MBD3L5A6NJ08 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
MBD3L5A6NJ08 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MBD3L5A6NJ08 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
MBD3L5A6NJ08 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC22.18■■□□□ 1.14
MBD3L5A6NJ08 AC007029.1-201ENST00000604183 313 ntBASIC22.18■■□□□ 1.14
MBD3L5A6NJ08 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
MBD3L5A6NJ08 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.18■■□□□ 1.14
MBD3L5A6NJ08 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.18■■□□□ 1.14
MBD3L5A6NJ08 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MBD3L5A6NJ08 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
MBD3L5A6NJ08 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MBD3L5A6NJ08 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
MBD3L5A6NJ08 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
MBD3L5A6NJ08 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
MBD3L5A6NJ08 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
MBD3L5A6NJ08 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MBD3L5A6NJ08 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC22.16■■□□□ 1.14
MBD3L5A6NJ08 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC22.16■■□□□ 1.14
MBD3L5A6NJ08 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
MBD3L5A6NJ08 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MBD3L5A6NJ08 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
MBD3L5A6NJ08 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.15■■□□□ 1.14
MBD3L5A6NJ08 SMPD5-203ENST00000639008 1464 ntBASIC22.15■■□□□ 1.14
MBD3L5A6NJ08 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
MBD3L5A6NJ08 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.14■■□□□ 1.14
MBD3L5A6NJ08 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
MBD3L5A6NJ08 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
MBD3L5A6NJ08 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
MBD3L5A6NJ08 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MBD3L5A6NJ08 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
MBD3L5A6NJ08 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
MBD3L5A6NJ08 PROC-203ENST00000409048 1586 ntTSL 5 BASIC22.13■■□□□ 1.13
MBD3L5A6NJ08 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
MBD3L5A6NJ08 KRT18P60-201ENST00000312876 1297 ntBASIC22.13■■□□□ 1.13
MBD3L5A6NJ08 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MBD3L5A6NJ08 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
MBD3L5A6NJ08 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
MBD3L5A6NJ08 AC025884.2-201ENST00000553429 711 ntBASIC22.12■■□□□ 1.13
MBD3L5A6NJ08 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.12■■□□□ 1.13
MBD3L5A6NJ08 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
MBD3L5A6NJ08 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
MBD3L5A6NJ08 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
MBD3L5A6NJ08 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.11■■□□□ 1.13
MBD3L5A6NJ08 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
MBD3L5A6NJ08 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.11■■□□□ 1.13
MBD3L5A6NJ08 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
MBD3L5A6NJ08 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
MBD3L5A6NJ08 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
MBD3L5A6NJ08 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
MBD3L5A6NJ08 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
MBD3L5A6NJ08 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
MBD3L5A6NJ08 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
MBD3L5A6NJ08 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
MBD3L5A6NJ08 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
MBD3L5A6NJ08 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.08■■□□□ 1.13
MBD3L5A6NJ08 GFER-205ENST00000569451 517 ntTSL 5 BASIC22.08■■□□□ 1.13
MBD3L5A6NJ08 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MBD3L5A6NJ08 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
MBD3L5A6NJ08 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.07■■□□□ 1.12
MBD3L5A6NJ08 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
MBD3L5A6NJ08 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
MBD3L5A6NJ08 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC22.06■■□□□ 1.12
MBD3L5A6NJ08 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MBD3L5A6NJ08 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.06■■□□□ 1.12
MBD3L5A6NJ08 AL033527.3-201ENST00000566366 1196 ntBASIC22.06■■□□□ 1.12
MBD3L5A6NJ08 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MBD3L5A6NJ08 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
MBD3L5A6NJ08 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
MBD3L5A6NJ08 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.05■■□□□ 1.12
MBD3L5A6NJ08 AC009831.1-201ENST00000580420 1582 ntBASIC22.05■■□□□ 1.12
MBD3L5A6NJ08 TSPY13P-201ENST00000338964 914 ntBASIC22.05■■□□□ 1.12
MBD3L5A6NJ08 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC22.05■■□□□ 1.12
MBD3L5A6NJ08 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
MBD3L5A6NJ08 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC22.05■■□□□ 1.12
MBD3L5A6NJ08 AC133552.2-201ENST00000619106 1032 ntBASIC22.05■■□□□ 1.12
MBD3L5A6NJ08 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
MBD3L5A6NJ08 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MBD3L5A6NJ08 RP9P-202ENST00000450133 1212 ntBASIC22.04■■□□□ 1.12
MBD3L5A6NJ08 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
MBD3L5A6NJ08 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
MBD3L5A6NJ08 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
MBD3L5A6NJ08 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
MBD3L5A6NJ08 AC004987.1-201ENST00000428627 508 ntBASIC22.03■■□□□ 1.12
MBD3L5A6NJ08 ATP5G2P3-201ENST00000429083 425 ntBASIC22.03■■□□□ 1.12
MBD3L5A6NJ08 PFN2-211ENST00000489155 636 ntTSL 4 BASIC22.03■■□□□ 1.12
MBD3L5A6NJ08 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
MBD3L5A6NJ08 AC026202.3-201ENST00000600805 1127 ntBASIC22.03■■□□□ 1.12
MBD3L5A6NJ08 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.03■■□□□ 1.12
MBD3L5A6NJ08 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
MBD3L5A6NJ08 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC22.02■■□□□ 1.12
MBD3L5A6NJ08 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.02■■□□□ 1.12
MBD3L5A6NJ08 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC22.02■■□□□ 1.12
MBD3L5A6NJ08 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
MBD3L5A6NJ08 HES4-204ENST00000484667 667 ntTSL 3 BASIC22.02■■□□□ 1.12
MBD3L5A6NJ08 AL592293.1-201ENST00000502889 1188 ntBASIC22.02■■□□□ 1.12
MBD3L5A6NJ08 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC22.02■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms