Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.28■■□□□ 1.8
TCRBV5S1A1TA0A578 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.28■■□□□ 1.8
TCRBV5S1A1TA0A578 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.27■■□□□ 1.8
TCRBV5S1A1TA0A578 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
TCRBV5S1A1TA0A578 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
TCRBV5S1A1TA0A578 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
TCRBV5S1A1TA0A578 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
TCRBV5S1A1TA0A578 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.26■■□□□ 1.79
TCRBV5S1A1TA0A578 CR559946.2-201ENST00000623684 991 ntBASIC26.26■■□□□ 1.79
TCRBV5S1A1TA0A578 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.26■■□□□ 1.79
TCRBV5S1A1TA0A578 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.25■■□□□ 1.79
TCRBV5S1A1TA0A578 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.25■■□□□ 1.79
TCRBV5S1A1TA0A578 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
TCRBV5S1A1TA0A578 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.25■■□□□ 1.79
TCRBV5S1A1TA0A578 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.25■■□□□ 1.79
TCRBV5S1A1TA0A578 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
TCRBV5S1A1TA0A578 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.25■■□□□ 1.79
TCRBV5S1A1TA0A578 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TCRBV5S1A1TA0A578 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
TCRBV5S1A1TA0A578 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC26.24■■□□□ 1.79
TCRBV5S1A1TA0A578 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
TCRBV5S1A1TA0A578 AL449106.1-201ENST00000608517 1980 ntBASIC26.24■■□□□ 1.79
TCRBV5S1A1TA0A578 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.23■■□□□ 1.79
TCRBV5S1A1TA0A578 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.22■■□□□ 1.79
TCRBV5S1A1TA0A578 AGPS-202ENST00000409888 815 ntTSL 4 BASIC26.22■■□□□ 1.79
TCRBV5S1A1TA0A578 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.22■■□□□ 1.79
TCRBV5S1A1TA0A578 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
TCRBV5S1A1TA0A578 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
TCRBV5S1A1TA0A578 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
TCRBV5S1A1TA0A578 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
TCRBV5S1A1TA0A578 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TCRBV5S1A1TA0A578 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
TCRBV5S1A1TA0A578 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
TCRBV5S1A1TA0A578 AC008813.1-201ENST00000536597 885 ntBASIC26.2■■□□□ 1.78
TCRBV5S1A1TA0A578 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.2■■□□□ 1.78
TCRBV5S1A1TA0A578 HLA-V-202ENST00000446817 847 ntBASIC26.19■■□□□ 1.78
TCRBV5S1A1TA0A578 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
TCRBV5S1A1TA0A578 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 MACF1-219ENST00000484793 834 ntTSL 2 BASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 MIR3648-2-201ENST00000581792 180 ntBASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 MIR3648-1-201ENST00000615959 180 ntBASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 AC148477.6-201ENST00000623746 465 ntBASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
TCRBV5S1A1TA0A578 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.17■■□□□ 1.78
TCRBV5S1A1TA0A578 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.17■■□□□ 1.78
TCRBV5S1A1TA0A578 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TCRBV5S1A1TA0A578 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
TCRBV5S1A1TA0A578 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
TCRBV5S1A1TA0A578 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
TCRBV5S1A1TA0A578 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
TCRBV5S1A1TA0A578 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.16■■□□□ 1.78
TCRBV5S1A1TA0A578 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.16■■□□□ 1.78
TCRBV5S1A1TA0A578 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
TCRBV5S1A1TA0A578 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.16■■□□□ 1.78
TCRBV5S1A1TA0A578 WHAMMP3-201ENST00000611636 1609 ntBASIC26.16■■□□□ 1.78
TCRBV5S1A1TA0A578 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.16■■□□□ 1.78
TCRBV5S1A1TA0A578 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
TCRBV5S1A1TA0A578 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC26.15■■□□□ 1.78
TCRBV5S1A1TA0A578 GDI1-215ENST00000630693 786 ntTSL 4 BASIC26.15■■□□□ 1.78
TCRBV5S1A1TA0A578 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC26.15■■□□□ 1.78
TCRBV5S1A1TA0A578 MIR219A2-201ENST00000608502 1504 ntBASIC26.14■■□□□ 1.78
TCRBV5S1A1TA0A578 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
TCRBV5S1A1TA0A578 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.14■■□□□ 1.77
TCRBV5S1A1TA0A578 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.13■■□□□ 1.77
TCRBV5S1A1TA0A578 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
TCRBV5S1A1TA0A578 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC26.13■■□□□ 1.77
TCRBV5S1A1TA0A578 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.13■■□□□ 1.77
TCRBV5S1A1TA0A578 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
TCRBV5S1A1TA0A578 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TCRBV5S1A1TA0A578 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.12■■□□□ 1.77
TCRBV5S1A1TA0A578 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TCRBV5S1A1TA0A578 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
TCRBV5S1A1TA0A578 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
TCRBV5S1A1TA0A578 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TCRBV5S1A1TA0A578 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
TCRBV5S1A1TA0A578 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC26.11■■□□□ 1.77
TCRBV5S1A1TA0A578 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.1■■□□□ 1.77
TCRBV5S1A1TA0A578 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
TCRBV5S1A1TA0A578 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
TCRBV5S1A1TA0A578 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TCRBV5S1A1TA0A578 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC26.1■■□□□ 1.77
TCRBV5S1A1TA0A578 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
TCRBV5S1A1TA0A578 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
TCRBV5S1A1TA0A578 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TCRBV5S1A1TA0A578 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
TCRBV5S1A1TA0A578 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC26.09■■□□□ 1.77
TCRBV5S1A1TA0A578 AC016575.1-201ENST00000607026 382 ntBASIC26.09■■□□□ 1.77
TCRBV5S1A1TA0A578 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
TCRBV5S1A1TA0A578 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC26.08■■□□□ 1.77
TCRBV5S1A1TA0A578 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC26.08■■□□□ 1.77
TCRBV5S1A1TA0A578 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
TCRBV5S1A1TA0A578 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
TCRBV5S1A1TA0A578 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC26.07■■□□□ 1.76
TCRBV5S1A1TA0A578 MIR7108-201ENST00000614319 87 ntBASIC26.07■■□□□ 1.76
TCRBV5S1A1TA0A578 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.07■■□□□ 1.76
TCRBV5S1A1TA0A578 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms