Protein–RNA interactions for Protein: A0A0C4DH27

TRGV8, T-cell receptor gamma variable 8 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV8A0A0C4DH27 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV8A0A0C4DH27 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
TRGV8A0A0C4DH27 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC22.41■■□□□ 1.18
TRGV8A0A0C4DH27 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC22.41■■□□□ 1.18
TRGV8A0A0C4DH27 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRGV8A0A0C4DH27 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
TRGV8A0A0C4DH27 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV8A0A0C4DH27 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV8A0A0C4DH27 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV8A0A0C4DH27 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC22.4■■□□□ 1.18
TRGV8A0A0C4DH27 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV8A0A0C4DH27 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.4■■□□□ 1.18
TRGV8A0A0C4DH27 AP004833.2-201ENST00000532228 1454 ntBASIC22.4■■□□□ 1.18
TRGV8A0A0C4DH27 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
TRGV8A0A0C4DH27 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC22.4■■□□□ 1.18
TRGV8A0A0C4DH27 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
TRGV8A0A0C4DH27 AC100797.4-201ENST00000631653 1827 ntBASIC22.39■■□□□ 1.17
TRGV8A0A0C4DH27 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.39■■□□□ 1.17
TRGV8A0A0C4DH27 BHLHE23-202ENST00000612929 1109 ntBASIC22.39■■□□□ 1.17
TRGV8A0A0C4DH27 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.39■■□□□ 1.17
TRGV8A0A0C4DH27 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
TRGV8A0A0C4DH27 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC22.38■■□□□ 1.17
TRGV8A0A0C4DH27 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
TRGV8A0A0C4DH27 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRGV8A0A0C4DH27 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
TRGV8A0A0C4DH27 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC22.38■■□□□ 1.17
TRGV8A0A0C4DH27 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC22.38■■□□□ 1.17
TRGV8A0A0C4DH27 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
TRGV8A0A0C4DH27 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC22.37■■□□□ 1.17
TRGV8A0A0C4DH27 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC22.37■■□□□ 1.17
TRGV8A0A0C4DH27 AC026202.3-201ENST00000600805 1127 ntBASIC22.37■■□□□ 1.17
TRGV8A0A0C4DH27 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.37■■□□□ 1.17
TRGV8A0A0C4DH27 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.36■■□□□ 1.17
TRGV8A0A0C4DH27 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
TRGV8A0A0C4DH27 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
TRGV8A0A0C4DH27 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRGV8A0A0C4DH27 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
TRGV8A0A0C4DH27 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC22.35■■□□□ 1.17
TRGV8A0A0C4DH27 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
TRGV8A0A0C4DH27 AL035685.1-201ENST00000636663 812 ntBASIC22.35■■□□□ 1.17
TRGV8A0A0C4DH27 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
TRGV8A0A0C4DH27 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC22.34■■□□□ 1.17
TRGV8A0A0C4DH27 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.34■■□□□ 1.17
TRGV8A0A0C4DH27 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.34■■□□□ 1.17
TRGV8A0A0C4DH27 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.34■■□□□ 1.17
TRGV8A0A0C4DH27 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC22.34■■□□□ 1.17
TRGV8A0A0C4DH27 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.33■■□□□ 1.17
TRGV8A0A0C4DH27 RP9P-202ENST00000450133 1212 ntBASIC22.33■■□□□ 1.17
TRGV8A0A0C4DH27 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.16
TRGV8A0A0C4DH27 ST7-AS1-201ENST00000456775 1889 ntBASIC22.32■■□□□ 1.16
TRGV8A0A0C4DH27 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRGV8A0A0C4DH27 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRGV8A0A0C4DH27 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
TRGV8A0A0C4DH27 DUX4L9-201ENST00000449051 1259 ntBASIC22.32■■□□□ 1.16
TRGV8A0A0C4DH27 AL451085.2-201ENST00000605085 799 ntBASIC22.32■■□□□ 1.16
TRGV8A0A0C4DH27 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC22.32■■□□□ 1.16
TRGV8A0A0C4DH27 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
TRGV8A0A0C4DH27 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC22.32■■□□□ 1.16
TRGV8A0A0C4DH27 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC22.31■■□□□ 1.16
TRGV8A0A0C4DH27 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRGV8A0A0C4DH27 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
TRGV8A0A0C4DH27 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRGV8A0A0C4DH27 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
TRGV8A0A0C4DH27 AC093536.1-201ENST00000569153 554 ntBASIC22.3■■□□□ 1.16
TRGV8A0A0C4DH27 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC22.3■■□□□ 1.16
TRGV8A0A0C4DH27 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRGV8A0A0C4DH27 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRGV8A0A0C4DH27 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
TRGV8A0A0C4DH27 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
TRGV8A0A0C4DH27 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
TRGV8A0A0C4DH27 AC025884.2-201ENST00000553429 711 ntBASIC22.29■■□□□ 1.16
TRGV8A0A0C4DH27 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC22.29■■□□□ 1.16
TRGV8A0A0C4DH27 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
TRGV8A0A0C4DH27 KRT8P33-201ENST00000508125 1423 ntBASIC22.29■■□□□ 1.16
TRGV8A0A0C4DH27 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRGV8A0A0C4DH27 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
TRGV8A0A0C4DH27 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC22.28■■□□□ 1.16
TRGV8A0A0C4DH27 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC22.28■■□□□ 1.16
TRGV8A0A0C4DH27 AC010980.1-201ENST00000587192 1142 ntBASIC22.28■■□□□ 1.16
TRGV8A0A0C4DH27 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC22.28■■□□□ 1.16
TRGV8A0A0C4DH27 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC22.28■■□□□ 1.16
TRGV8A0A0C4DH27 AC139795.1-202ENST00000500444 432 ntBASIC22.27■■□□□ 1.16
TRGV8A0A0C4DH27 TRIR-205ENST00000592273 783 ntTSL 3 BASIC22.27■■□□□ 1.16
TRGV8A0A0C4DH27 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.27■■□□□ 1.16
TRGV8A0A0C4DH27 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
TRGV8A0A0C4DH27 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
TRGV8A0A0C4DH27 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC22.26■■□□□ 1.15
TRGV8A0A0C4DH27 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRGV8A0A0C4DH27 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
TRGV8A0A0C4DH27 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC22.26■■□□□ 1.15
TRGV8A0A0C4DH27 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRGV8A0A0C4DH27 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.25■■□□□ 1.15
TRGV8A0A0C4DH27 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
TRGV8A0A0C4DH27 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
TRGV8A0A0C4DH27 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
TRGV8A0A0C4DH27 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
TRGV8A0A0C4DH27 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
TRGV8A0A0C4DH27 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
TRGV8A0A0C4DH27 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC22.24■■□□□ 1.15
TRGV8A0A0C4DH27 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms