Protein–RNA interactions for Protein: A0A0B4J1Z2

IGKV1D-43, Immunoglobulin kappa variable 1D-43, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-43A0A0B4J1Z2 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC22.13■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.13■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.12■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC22.11■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC22.11■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC22.1■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.1■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 AL449106.1-201ENST00000608517 1980 ntBASIC22.08■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC22.08■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
IGKV1D-43A0A0B4J1Z2 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC22.07■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.07■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC22.07■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.07■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 CR559946.2-201ENST00000623684 991 ntBASIC22.07■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC22.06■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.06■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC22.05■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.04■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.04■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 HLA-V-202ENST00000446817 847 ntBASIC22.03■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.02■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
IGKV1D-43A0A0B4J1Z2 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.01■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC22■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC22■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 WHAMMP3-201ENST00000611636 1609 ntBASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 AC008813.1-201ENST00000536597 885 ntBASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 MIR3648-2-201ENST00000581792 180 ntBASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 MIR3648-1-201ENST00000615959 180 ntBASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 MIR219A2-201ENST00000608502 1504 ntBASIC21.98■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC21.98■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC21.98■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.98■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC21.97■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.97■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 AP004609.3-201ENST00000610705 1884 ntBASIC21.96■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC21.96■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 MACF1-219ENST00000484793 834 ntTSL 2 BASIC21.96■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.95■■□□□ 1.11
IGKV1D-43A0A0B4J1Z2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC21.95■■□□□ 1.1
IGKV1D-43A0A0B4J1Z2 AC016575.1-201ENST00000607026 382 ntBASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms