Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.84■□□□□ 0.61
TRAV8-1A0A0A6YYK1 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
TRAV8-1A0A0A6YYK1 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-1A0A0A6YYK1 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-1A0A0A6YYK1 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-1A0A0A6YYK1 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TRAV8-1A0A0A6YYK1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TRAV8-1A0A0A6YYK1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TRAV8-1A0A0A6YYK1 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC18.83■□□□□ 0.61
TRAV8-1A0A0A6YYK1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV8-1A0A0A6YYK1 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TRAV8-1A0A0A6YYK1 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV8-1A0A0A6YYK1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV8-1A0A0A6YYK1 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TRAV8-1A0A0A6YYK1 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC18.83■□□□□ 0.6
TRAV8-1A0A0A6YYK1 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TRAV8-1A0A0A6YYK1 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV8-1A0A0A6YYK1 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-1A0A0A6YYK1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-1A0A0A6YYK1 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-1A0A0A6YYK1 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.82■□□□□ 0.6
TRAV8-1A0A0A6YYK1 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-1A0A0A6YYK1 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TRAV8-1A0A0A6YYK1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TRAV8-1A0A0A6YYK1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
TRAV8-1A0A0A6YYK1 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-1A0A0A6YYK1 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-1A0A0A6YYK1 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-1A0A0A6YYK1 MAD2L2-201ENST00000235310 1860 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
TRAV8-1A0A0A6YYK1 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-1A0A0A6YYK1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC18.81■□□□□ 0.6
TRAV8-1A0A0A6YYK1 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
TRAV8-1A0A0A6YYK1 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
TRAV8-1A0A0A6YYK1 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV8-1A0A0A6YYK1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV8-1A0A0A6YYK1 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
TRAV8-1A0A0A6YYK1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV8-1A0A0A6YYK1 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV8-1A0A0A6YYK1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.8■□□□□ 0.6
TRAV8-1A0A0A6YYK1 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TRAV8-1A0A0A6YYK1 AC092803.2-201ENST00000564287 1899 ntBASIC18.8■□□□□ 0.6
TRAV8-1A0A0A6YYK1 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.79■□□□□ 0.6
TRAV8-1A0A0A6YYK1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TRAV8-1A0A0A6YYK1 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 AP004609.3-201ENST00000610705 1884 ntBASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV8-1A0A0A6YYK1 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-1A0A0A6YYK1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-1A0A0A6YYK1 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-1A0A0A6YYK1 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
TRAV8-1A0A0A6YYK1 DUSP8P4-201ENST00000399538 1761 ntBASIC18.77■□□□□ 0.6
TRAV8-1A0A0A6YYK1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV8-1A0A0A6YYK1 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV8-1A0A0A6YYK1 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
TRAV8-1A0A0A6YYK1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV8-1A0A0A6YYK1 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV8-1A0A0A6YYK1 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
TRAV8-1A0A0A6YYK1 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV8-1A0A0A6YYK1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
TRAV8-1A0A0A6YYK1 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV8-1A0A0A6YYK1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.75■□□□□ 0.59
TRAV8-1A0A0A6YYK1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV8-1A0A0A6YYK1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-1A0A0A6YYK1 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-1A0A0A6YYK1 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-1A0A0A6YYK1 LINC00273-201ENST00000539813 1452 ntBASIC18.74■□□□□ 0.59
TRAV8-1A0A0A6YYK1 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.74■□□□□ 0.59
TRAV8-1A0A0A6YYK1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV8-1A0A0A6YYK1 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV8-1A0A0A6YYK1 AC005559.1-201ENST00000589661 871 ntBASIC18.73■□□□□ 0.59
TRAV8-1A0A0A6YYK1 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV8-1A0A0A6YYK1 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-1A0A0A6YYK1 AC108673.1-201ENST00000510422 1159 ntBASIC18.72■□□□□ 0.59
TRAV8-1A0A0A6YYK1 MIR6090-201ENST00000622481 60 ntBASIC18.72■□□□□ 0.59
TRAV8-1A0A0A6YYK1 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.72■□□□□ 0.59
TRAV8-1A0A0A6YYK1 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TRAV8-1A0A0A6YYK1 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-1A0A0A6YYK1 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-1A0A0A6YYK1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-1A0A0A6YYK1 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV8-1A0A0A6YYK1 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV8-1A0A0A6YYK1 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-1A0A0A6YYK1 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-1A0A0A6YYK1 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV8-1A0A0A6YYK1 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
TRAV8-1A0A0A6YYK1 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-1A0A0A6YYK1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-1A0A0A6YYK1 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV8-1A0A0A6YYK1 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 98.6 ms