Protein–RNA interactions for Protein: A0A0A6YY99

TNFSF12-TNFSF13, Protein TNFSF12-TNFSF13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.72■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.72■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.72■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.71■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 CHST11-203ENST00000547956 936 ntTSL 2 BASIC22.71■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.71■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
TNFSF12-TNFSF13A0A0A6YY99 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.7■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC22.7■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.7■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.7■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 MIR219A2-201ENST00000608502 1504 ntBASIC22.69■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.68■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC22.66■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC22.66■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.65■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC22.65■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC22.65■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC22.64■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
TNFSF12-TNFSF13A0A0A6YY99 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC22.64■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC22.63■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.62■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.62■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.61■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC22.6■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC22.6■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.59■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC22.59■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.58■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
TNFSF12-TNFSF13A0A0A6YY99 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 WHAMMP3-201ENST00000611636 1609 ntBASIC22.57■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.56■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC22.56■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC22.56■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC22.56■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
TNFSF12-TNFSF13A0A0A6YY99 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms