Protein–RNA interactions for Protein: Q9Y6A9

SPCS1, Signal peptidase complex subunit 1, humanhuman

Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS1Q9Y6A9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS1Q9Y6A9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.65□□□□□ -0.38
SPCS1Q9Y6A9 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.65□□□□□ -0.38
SPCS1Q9Y6A9 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SPCS1Q9Y6A9 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
SPCS1Q9Y6A9 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC12.65□□□□□ -0.39
SPCS1Q9Y6A9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 AP001271.2-201ENST00000624018 1556 ntBASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 DBET-201ENST00000630918 3363 ntBASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 FHDC1-202ENST00000511601 6583 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC12.64□□□□□ -0.39
SPCS1Q9Y6A9 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 AC105917.1-201ENST00000506637 2539 ntBASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 SLC37A4-217ENST00000545985 2606 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 COL11A2-201ENST00000341947 6425 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
SPCS1Q9Y6A9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS1Q9Y6A9 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS1Q9Y6A9 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC12.62□□□□□ -0.39
SPCS1Q9Y6A9 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
SPCS1Q9Y6A9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
SPCS1Q9Y6A9 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC12.62□□□□□ -0.39
SPCS1Q9Y6A9 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms