Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
PCDHGA11Q9Y5H2 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 AP000593.1-201ENST00000393668 712 ntBASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 C2orf69P3-201ENST00000565542 1120 ntBASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 MIR3180-5-201ENST00000583743 153 ntBASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 MYLKP1-201ENST00000509077 1580 ntBASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
PCDHGA11Q9Y5H2 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
PCDHGA11Q9Y5H2 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.89■□□□□ 0.46
PCDHGA11Q9Y5H2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.46
PCDHGA11Q9Y5H2 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC17.89■□□□□ 0.46
PCDHGA11Q9Y5H2 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
PCDHGA11Q9Y5H2 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 HIST1H2APS4-201ENST00000362070 348 ntBASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 MIR1238-201ENST00000408483 83 ntBASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 AL355075.4-201ENST00000554988 638 ntBASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.89■□□□□ 0.45
PCDHGA11Q9Y5H2 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 AC090340.1-201ENST00000620778 4980 ntBASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 AC116562.4-202ENST00000641738 218 ntBASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.88■□□□□ 0.45
PCDHGA11Q9Y5H2 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms