Protein–RNA interactions for Protein: Q9UQN3

CHMP2B, Charged multivesicular body protein 2b, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2BQ9UQN3 AC008622.2-201ENST00000617006 1229 ntBASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CHMP2BQ9UQN3 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 AL109659.2-201ENST00000606809 1674 ntBASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CHMP2BQ9UQN3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 RARRES2P10-201ENST00000564312 460 ntBASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CHMP2BQ9UQN3 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 MESTP1-201ENST00000404287 994 ntBASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 CD99P1-205ENST00000527459 561 ntBASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.77■□□□□ 0.6
CHMP2BQ9UQN3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CHMP2BQ9UQN3 AC138028.4-201ENST00000564984 1845 ntBASIC18.77■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms