Protein–RNA interactions for Protein: Q9H211

CDT1, DNA replication factor Cdt1, humanhuman

Predictions only

Length 546 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1Q9H211 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.93■□□□□ 0.78
CDT1Q9H211 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.93■□□□□ 0.78
CDT1Q9H211 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.93■□□□□ 0.78
CDT1Q9H211 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.93■□□□□ 0.78
CDT1Q9H211 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 TSSC2-201ENST00000450217 709 ntBASIC19.93■□□□□ 0.78
CDT1Q9H211 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.93■□□□□ 0.78
CDT1Q9H211 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.93■□□□□ 0.78
CDT1Q9H211 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.93■□□□□ 0.78
CDT1Q9H211 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC19.93■□□□□ 0.78
CDT1Q9H211 GPR32P1-201ENST00000601788 811 ntBASIC19.93■□□□□ 0.78
CDT1Q9H211 NPAP1P7-201ENST00000613027 823 ntBASIC19.93■□□□□ 0.78
CDT1Q9H211 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.93■□□□□ 0.78
CDT1Q9H211 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
CDT1Q9H211 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
CDT1Q9H211 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDT1Q9H211 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDT1Q9H211 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 ATP5G2P1-201ENST00000433580 426 ntBASIC19.92■□□□□ 0.78
CDT1Q9H211 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.92■□□□□ 0.78
CDT1Q9H211 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
CDT1Q9H211 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.92■□□□□ 0.78
CDT1Q9H211 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.92■□□□□ 0.78
CDT1Q9H211 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDT1Q9H211 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.91■□□□□ 0.78
CDT1Q9H211 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDT1Q9H211 AP002383.4-201ENST00000442518 975 ntBASIC19.91■□□□□ 0.78
CDT1Q9H211 PPOX-214ENST00000535223 664 ntTSL 3 BASIC19.91■□□□□ 0.78
CDT1Q9H211 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.91■□□□□ 0.78
CDT1Q9H211 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.91■□□□□ 0.78
CDT1Q9H211 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
CDT1Q9H211 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.91■□□□□ 0.78
CDT1Q9H211 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CDT1Q9H211 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDT1Q9H211 LINC01126-201ENST00000623515 1646 ntBASIC19.91■□□□□ 0.78
CDT1Q9H211 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDT1Q9H211 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC19.9■□□□□ 0.78
CDT1Q9H211 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.9■□□□□ 0.78
CDT1Q9H211 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.9■□□□□ 0.78
CDT1Q9H211 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.9■□□□□ 0.78
CDT1Q9H211 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.9■□□□□ 0.78
CDT1Q9H211 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.9■□□□□ 0.78
CDT1Q9H211 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDT1Q9H211 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms