Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 VILL-207ENST00000465644 1857 ntTSL 5 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC10.7□□□□□ -0.7
CYSTM1Q9H1C7 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 PXN-221ENST00000637617 3246 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 PRSS30P-203ENST00000476276 2855 ntTSL 2 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 COBL-210ENST00000632460 1941 ntTSL 5 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 NRTN-201ENST00000303212 1109 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 RER1-203ENST00000378513 3000 ntTSL 3 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 PGR-210ENST00000619228 3038 ntTSL 5 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 NME9-203ENST00000383180 2133 ntTSL 2 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 AL359183.1-201ENST00000623796 2132 ntBASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
CYSTM1Q9H1C7 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 AC093677.2-201ENST00000600169 1863 ntBASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 AC005252.3-201ENST00000623855 2258 ntBASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ARTN-201ENST00000372354 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 RNF166-209ENST00000567844 633 ntTSL 5 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
CYSTM1Q9H1C7 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms