Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC18.08■□□□□ 0.48
NPAS2Q99743 ABBA01031674.1-201ENST00000635145 728 ntBASIC18.08■□□□□ 0.48
NPAS2Q99743 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC18.08■□□□□ 0.48
NPAS2Q99743 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS2Q99743 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
NPAS2Q99743 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.07■□□□□ 0.48
NPAS2Q99743 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS2Q99743 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC18.07■□□□□ 0.48
NPAS2Q99743 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.07■□□□□ 0.48
NPAS2Q99743 AC116562.2-201ENST00000507042 360 ntBASIC18.07■□□□□ 0.48
NPAS2Q99743 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.07■□□□□ 0.48
NPAS2Q99743 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC18.07■□□□□ 0.48
NPAS2Q99743 AL445675.2-201ENST00000620291 557 ntBASIC18.07■□□□□ 0.48
NPAS2Q99743 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS2Q99743 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.07■□□□□ 0.48
NPAS2Q99743 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
NPAS2Q99743 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.07■□□□□ 0.48
NPAS2Q99743 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NPAS2Q99743 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS2Q99743 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.06■□□□□ 0.48
NPAS2Q99743 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
NPAS2Q99743 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.06■□□□□ 0.48
NPAS2Q99743 MESTP1-201ENST00000404287 994 ntBASIC18.06■□□□□ 0.48
NPAS2Q99743 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.06■□□□□ 0.48
NPAS2Q99743 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.06■□□□□ 0.48
NPAS2Q99743 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
NPAS2Q99743 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
NPAS2Q99743 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS2Q99743 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 AC012306.2-201ENST00000609350 630 ntBASIC18.06■□□□□ 0.48
NPAS2Q99743 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.06■□□□□ 0.48
NPAS2Q99743 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
NPAS2Q99743 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.06■□□□□ 0.48
NPAS2Q99743 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
NPAS2Q99743 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.05■□□□□ 0.48
NPAS2Q99743 AC135776.1-201ENST00000319817 2481 ntBASIC18.05■□□□□ 0.48
NPAS2Q99743 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
NPAS2Q99743 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 TSPY21P-201ENST00000433481 731 ntBASIC18.05■□□□□ 0.48
NPAS2Q99743 PPP1R14BP5-201ENST00000440334 435 ntBASIC18.05■□□□□ 0.48
NPAS2Q99743 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.05■□□□□ 0.48
NPAS2Q99743 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.05■□□□□ 0.48
NPAS2Q99743 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.05■□□□□ 0.48
NPAS2Q99743 AP000525.1-201ENST00000608286 694 ntBASIC18.05■□□□□ 0.48
NPAS2Q99743 AC133561.5-201ENST00000635547 218 ntBASIC18.05■□□□□ 0.48
NPAS2Q99743 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.05■□□□□ 0.48
NPAS2Q99743 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
NPAS2Q99743 KRT8P9-201ENST00000558927 1449 ntBASIC18.05■□□□□ 0.48
NPAS2Q99743 AC139713.2-201ENST00000641328 2723 ntBASIC18.05■□□□□ 0.48
NPAS2Q99743 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
NPAS2Q99743 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.04■□□□□ 0.48
NPAS2Q99743 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.04■□□□□ 0.48
NPAS2Q99743 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC18.04■□□□□ 0.48
NPAS2Q99743 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
NPAS2Q99743 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
NPAS2Q99743 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms