Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.6■□□□□ 0.25
SPENQ96T58 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.6■□□□□ 0.25
SPENQ96T58 AC073648.2-201ENST00000510116 352 ntBASIC16.6■□□□□ 0.25
SPENQ96T58 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.6■□□□□ 0.25
SPENQ96T58 AC140113.2-201ENST00000604370 208 ntBASIC16.6■□□□□ 0.25
SPENQ96T58 AP001269.4-201ENST00000609611 512 ntBASIC16.6■□□□□ 0.25
SPENQ96T58 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SPENQ96T58 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.6■□□□□ 0.25
SPENQ96T58 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SPENQ96T58 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC16.6■□□□□ 0.25
SPENQ96T58 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SPENQ96T58 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC16.6■□□□□ 0.25
SPENQ96T58 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.6■□□□□ 0.25
SPENQ96T58 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SPENQ96T58 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC16.59■□□□□ 0.25
SPENQ96T58 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.59■□□□□ 0.25
SPENQ96T58 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC16.59■□□□□ 0.25
SPENQ96T58 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SPENQ96T58 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.59■□□□□ 0.25
SPENQ96T58 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.59■□□□□ 0.25
SPENQ96T58 AF186996.4-201ENST00000467186 377 ntBASIC16.59■□□□□ 0.25
SPENQ96T58 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 AC114341.1-201ENST00000618070 349 ntBASIC16.59■□□□□ 0.25
SPENQ96T58 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SPENQ96T58 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 KATNBL1P6-202ENST00000562413 1466 ntBASIC16.59■□□□□ 0.25
SPENQ96T58 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
SPENQ96T58 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SPENQ96T58 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.59■□□□□ 0.25
SPENQ96T58 MINOS1P3-201ENST00000457048 203 ntBASIC16.58■□□□□ 0.25
SPENQ96T58 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.58■□□□□ 0.25
SPENQ96T58 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC16.58■□□□□ 0.25
SPENQ96T58 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.58■□□□□ 0.25
SPENQ96T58 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPENQ96T58 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
SPENQ96T58 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPENQ96T58 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.24
SPENQ96T58 RBSN-204ENST00000449050 903 ntTSL 2 BASIC16.58■□□□□ 0.24
SPENQ96T58 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.58■□□□□ 0.24
SPENQ96T58 SART3-203ENST00000546611 1184 ntBASIC16.58■□□□□ 0.24
SPENQ96T58 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPENQ96T58 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.58■□□□□ 0.24
SPENQ96T58 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SPENQ96T58 AL032819.2-201ENST00000624543 2162 ntBASIC16.58■□□□□ 0.24
SPENQ96T58 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC16.58■□□□□ 0.24
SPENQ96T58 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.58■□□□□ 0.24
SPENQ96T58 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC16.58■□□□□ 0.24
SPENQ96T58 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.58■□□□□ 0.24
SPENQ96T58 MIR3180-4-201ENST00000582223 153 ntBASIC16.58■□□□□ 0.24
SPENQ96T58 AC024563.2-201ENST00000603282 481 ntBASIC16.58■□□□□ 0.24
SPENQ96T58 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC16.58■□□□□ 0.24
SPENQ96T58 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPENQ96T58 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPENQ96T58 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SPENQ96T58 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SPENQ96T58 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.57■□□□□ 0.24
SPENQ96T58 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.57■□□□□ 0.24
SPENQ96T58 AL138831.2-201ENST00000606564 490 ntBASIC16.57■□□□□ 0.24
SPENQ96T58 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SPENQ96T58 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SPENQ96T58 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.57■□□□□ 0.24
SPENQ96T58 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.57■□□□□ 0.24
SPENQ96T58 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.57■□□□□ 0.24
SPENQ96T58 AL355877.3-201ENST00000622820 899 ntBASIC16.57■□□□□ 0.24
SPENQ96T58 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.57■□□□□ 0.24
SPENQ96T58 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SPENQ96T58 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.57■□□□□ 0.24
SPENQ96T58 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.57■□□□□ 0.24
SPENQ96T58 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SPENQ96T58 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SPENQ96T58 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms