Protein–RNA interactions for Protein: Q96FV0

LRRC46, Leucine-rich repeat-containing protein 46, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC46Q96FV0 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 AP000997.3-201ENST00000623333 2250 ntBASIC16.61■□□□□ 0.25
LRRC46Q96FV0 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRRC46Q96FV0 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 TPM4P1-201ENST00000436100 807 ntBASIC16.6■□□□□ 0.25
LRRC46Q96FV0 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 MCCD1P1-208ENST00000445732 328 ntBASIC16.6■□□□□ 0.25
LRRC46Q96FV0 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.6■□□□□ 0.25
LRRC46Q96FV0 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRRC46Q96FV0 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 TSPY23P-201ENST00000440136 739 ntBASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 AC106820.2-201ENST00000563775 3264 ntBASIC16.59■□□□□ 0.25
LRRC46Q96FV0 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.59■□□□□ 0.25
LRRC46Q96FV0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms