Protein–RNA interactions for Protein: Q96DX7

TRIM44, Tripartite motif-containing protein 44, humanhuman

Predicted RBP Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM44Q96DX7 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC20.89■□□□□ 0.94
TRIM44Q96DX7 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
TRIM44Q96DX7 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC20.89■□□□□ 0.94
TRIM44Q96DX7 AC063926.3-201ENST00000624734 5658 ntBASIC20.89■□□□□ 0.94
TRIM44Q96DX7 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 AP001160.3-201ENST00000601484 763 ntBASIC20.89■□□□□ 0.93
TRIM44Q96DX7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 MPST-208ENST00000628507 698 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC20.89■□□□□ 0.93
TRIM44Q96DX7 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 LINC00602-201ENST00000629776 2065 ntBASIC20.88■□□□□ 0.93
TRIM44Q96DX7 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 POR-209ENST00000439269 1858 ntTSL 2 BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
TRIM44Q96DX7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC20.87■□□□□ 0.93
TRIM44Q96DX7 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 AL513477.1-201ENST00000602865 2407 ntBASIC20.87■□□□□ 0.93
TRIM44Q96DX7 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
TRIM44Q96DX7 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 TSPY26P-202ENST00000565928 3884 ntBASIC20.86■□□□□ 0.93
TRIM44Q96DX7 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
TRIM44Q96DX7 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms