Protein–RNA interactions for Protein: Q96CX6

LRRC58, Leucine-rich repeat-containing protein 58, humanhuman

Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC58Q96CX6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LRRC58Q96CX6 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 AC004980.1-204ENST00000429707 299 ntBASIC17.56■□□□□ 0.4
LRRC58Q96CX6 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LRRC58Q96CX6 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 AC091390.4-202ENST00000476426 537 ntBASIC17.55■□□□□ 0.4
LRRC58Q96CX6 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.55■□□□□ 0.4
LRRC58Q96CX6 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 AL645608.8-201ENST00000606034 2086 ntBASIC17.55■□□□□ 0.4
LRRC58Q96CX6 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
LRRC58Q96CX6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 KRT17P3-201ENST00000420566 1262 ntBASIC17.54■□□□□ 0.4
LRRC58Q96CX6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.54■□□□□ 0.4
LRRC58Q96CX6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms