Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
VPS33AQ96AX1 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS33AQ96AX1 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
VPS33AQ96AX1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.76■□□□□ 0.43
VPS33AQ96AX1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS33AQ96AX1 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS33AQ96AX1 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
VPS33AQ96AX1 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 AC091390.4-202ENST00000476426 537 ntBASIC17.75■□□□□ 0.43
VPS33AQ96AX1 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 RCC2P3-201ENST00000418112 1537 ntBASIC17.75■□□□□ 0.43
VPS33AQ96AX1 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
VPS33AQ96AX1 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 AC008556.1-201ENST00000610908 2040 ntBASIC17.74■□□□□ 0.43
VPS33AQ96AX1 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 LINC00896-202ENST00000609602 2128 ntBASIC17.74■□□□□ 0.43
VPS33AQ96AX1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
VPS33AQ96AX1 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 AC138028.4-201ENST00000564984 1845 ntBASIC17.73■□□□□ 0.43
VPS33AQ96AX1 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.73■□□□□ 0.43
VPS33AQ96AX1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms