Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 KRT8P7-201ENST00000533003 1432 ntBASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 KRT8P50-201ENST00000562022 1438 ntBASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 AC092338.2-201ENST00000568827 1415 ntBASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 CCR12P-201ENST00000446203 998 ntBASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 SNX21-213ENST00000614929 587 ntTSL 5 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC16.9■□□□□ 0.3
LSMEM1Q8N8F7 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
LSMEM1Q8N8F7 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC16.89■□□□□ 0.3
LSMEM1Q8N8F7 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.3
LSMEM1Q8N8F7 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 HOXB1-202ENST00000577092 1414 ntBASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 AP003041.3-201ENST00000527151 707 ntBASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 WWOX-216ENST00000569818 525 ntBASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 AP000525.1-201ENST00000608286 694 ntBASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 AL513477.1-201ENST00000602865 2407 ntBASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 AC135776.1-201ENST00000319817 2481 ntBASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 AC036111.1-201ENST00000533973 1582 ntBASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSMEM1Q8N8F7 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 AC093677.2-201ENST00000600169 1863 ntBASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.88■□□□□ 0.29
LSMEM1Q8N8F7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.87■□□□□ 0.29
LSMEM1Q8N8F7 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSMEM1Q8N8F7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSMEM1Q8N8F7 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.87■□□□□ 0.29
LSMEM1Q8N8F7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC16.87■□□□□ 0.29
LSMEM1Q8N8F7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.4 ms