Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 AL162741.1-201ENST00000565563 1558 ntBASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
TTC9CQ8N5M4 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 KRT8P9-201ENST00000558927 1449 ntBASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
TTC9CQ8N5M4 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 CRAT-202ENST00000393384 973 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 AL512604.3-201ENST00000569583 964 ntBASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 KRT8P50-201ENST00000562022 1438 ntBASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC14.58□□□□□ -0.08
TTC9CQ8N5M4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 BICD1-207ENST00000551848 1962 ntBASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 AC135050.7-201ENST00000624508 2218 ntBASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC14.57□□□□□ -0.08
TTC9CQ8N5M4 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC9CQ8N5M4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC9CQ8N5M4 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
TTC9CQ8N5M4 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.56□□□□□ -0.08
TTC9CQ8N5M4 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms