Protein–RNA interactions for Protein: Q8IYJ1

CPNE9, Copine-9, humanhuman

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9Q8IYJ1 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 AC012313.1-201ENST00000593393 3059 ntBASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CPNE9Q8IYJ1 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 AC099343.3-201ENST00000605834 2503 ntBASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 EGLN1P1-201ENST00000531623 762 ntBASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC18.25■□□□□ 0.51
CPNE9Q8IYJ1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 AL354751.1-201ENST00000412768 1863 ntBASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 KRT8P50-201ENST00000562022 1438 ntBASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 AC138932.1-201ENST00000534164 6830 ntBASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 NAPSB-206ENST00000562112 1266 ntBASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
CPNE9Q8IYJ1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.23■□□□□ 0.51
CPNE9Q8IYJ1 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
CPNE9Q8IYJ1 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 58.2 ms