Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 PRSS44-201ENST00000515154 1146 ntBASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
NUDCD3Q8IVD9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
NUDCD3Q8IVD9 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUDCD3Q8IVD9 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.33■□□□□ 0.53
NUDCD3Q8IVD9 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.33■□□□□ 0.53
NUDCD3Q8IVD9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUDCD3Q8IVD9 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
NUDCD3Q8IVD9 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUDCD3Q8IVD9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NUDCD3Q8IVD9 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
NUDCD3Q8IVD9 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUDCD3Q8IVD9 PRORSD1P-202ENST00000563365 2154 ntBASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 FLJ13224-201ENST00000313737 1514 ntBASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUDCD3Q8IVD9 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 PTPA-216ENST00000432651 857 ntTSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 MAP2K4P1-201ENST00000438453 1195 ntBASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 RCC2P3-201ENST00000418112 1537 ntBASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.32■□□□□ 0.52
NUDCD3Q8IVD9 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms