Protein–RNA interactions for Protein: Q6ZTQ4

CDHR3, Cadherin-related family member 3, humanhuman

Predictions only

Length 885 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3Q6ZTQ4 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 FITM1-202ENST00000559294 800 ntBASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 AC130371.2-201ENST00000619443 611 ntBASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDHR3Q6ZTQ4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 AC008556.1-201ENST00000610908 2040 ntBASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 AC008040.2-201ENST00000461049 708 ntBASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 AC011298.2-201ENST00000617989 482 ntBASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CDHR3Q6ZTQ4 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
CDHR3Q6ZTQ4 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AC112777.1-201ENST00000540175 1423 ntBASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AC004951.3-201ENST00000418645 1148 ntBASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 AC012306.2-201ENST00000609350 630 ntBASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 DGCR10-201ENST00000609839 495 ntBASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CDHR3Q6ZTQ4 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.51■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms