Protein–RNA interactions for Protein: Q6NT89

TRNP1, TMF-regulated nuclear protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRNP1Q6NT89 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC19.2■□□□□ 0.66
TRNP1Q6NT89 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 AL390961.4-201ENST00000623958 2535 ntBASIC19.2■□□□□ 0.66
TRNP1Q6NT89 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRNP1Q6NT89 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 AL162741.1-201ENST00000565563 1558 ntBASIC19.19■□□□□ 0.66
TRNP1Q6NT89 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 PHGDH-209ENST00000641074 1780 ntBASIC19.19■□□□□ 0.66
TRNP1Q6NT89 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.19■□□□□ 0.66
TRNP1Q6NT89 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 RASA4DP-201ENST00000460726 1199 ntBASIC19.18■□□□□ 0.66
TRNP1Q6NT89 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 AC140113.3-201ENST00000605663 199 ntBASIC19.18■□□□□ 0.66
TRNP1Q6NT89 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
TRNP1Q6NT89 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 REEP1-209ENST00000541910 969 ntTSL 2 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 FLYWCH1P1-201ENST00000460917 1874 ntBASIC19.17■□□□□ 0.66
TRNP1Q6NT89 ABALON-201ENST00000629058 1903 ntBASIC19.17■□□□□ 0.66
TRNP1Q6NT89 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
TRNP1Q6NT89 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRNP1Q6NT89 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
TRNP1Q6NT89 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
TRNP1Q6NT89 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms