Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
RNF43Q68DV7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 WIZP1-201ENST00000531444 2299 ntBASIC19.35■□□□□ 0.69
RNF43Q68DV7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
RNF43Q68DV7 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.34■□□□□ 0.69
RNF43Q68DV7 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 AP000523.1-201ENST00000398242 1049 ntBASIC19.34■□□□□ 0.69
RNF43Q68DV7 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 AL691432.3-201ENST00000621860 400 ntBASIC19.34■□□□□ 0.69
RNF43Q68DV7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
RNF43Q68DV7 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.34■□□□□ 0.69
RNF43Q68DV7 FP475955.4-201ENST00000623131 1990 ntBASIC19.33■□□□□ 0.69
RNF43Q68DV7 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF43Q68DV7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
RNF43Q68DV7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF43Q68DV7 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
RNF43Q68DV7 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
RNF43Q68DV7 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
RNF43Q68DV7 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.33■□□□□ 0.69
RNF43Q68DV7 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF43Q68DV7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF43Q68DV7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC19.33■□□□□ 0.68
RNF43Q68DV7 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF43Q68DV7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF43Q68DV7 AL023973.1-201ENST00000624619 620 ntBASIC19.33■□□□□ 0.68
RNF43Q68DV7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.33■□□□□ 0.68
RNF43Q68DV7 AL031598.1-201ENST00000561511 1773 ntBASIC19.33■□□□□ 0.68
RNF43Q68DV7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
RNF43Q68DV7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF43Q68DV7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF43Q68DV7 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF43Q68DV7 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF43Q68DV7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.33■□□□□ 0.68
RNF43Q68DV7 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF43Q68DV7 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
RNF43Q68DV7 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF43Q68DV7 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF43Q68DV7 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
RNF43Q68DV7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.32■□□□□ 0.68
RNF43Q68DV7 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 HOMER2P1-201ENST00000455653 964 ntBASIC19.32■□□□□ 0.68
RNF43Q68DV7 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 CLEC4GP1-201ENST00000596555 870 ntBASIC19.32■□□□□ 0.68
RNF43Q68DV7 NDUFV2-AS1-203ENST00000608008 779 ntBASIC19.32■□□□□ 0.68
RNF43Q68DV7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
RNF43Q68DV7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
RNF43Q68DV7 AL512353.2-201ENST00000448759 1962 ntBASIC19.32■□□□□ 0.68
RNF43Q68DV7 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms