Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 SNAI3-AS1-205ENST00000568633 2096 ntBASIC17.79■□□□□ 0.44
RNF220Q5VTB9 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
RNF220Q5VTB9 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 AP003097.1-201ENST00000530657 1135 ntBASIC17.78■□□□□ 0.44
RNF220Q5VTB9 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 UBALD1-205ENST00000590891 2641 ntBASIC17.78■□□□□ 0.44
RNF220Q5VTB9 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
RNF220Q5VTB9 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 SDHAP1-207ENST00000440850 2000 ntBASIC17.77■□□□□ 0.44
RNF220Q5VTB9 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RNF220Q5VTB9 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.43
RNF220Q5VTB9 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 Six3os1_6.1-201ENST00000620790 196 ntBASIC17.76■□□□□ 0.43
RNF220Q5VTB9 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RNF220Q5VTB9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms