Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.15■□□□□ 0.5
CDKL1Q00532 CCR12P-201ENST00000446203 998 ntBASIC18.15■□□□□ 0.5
CDKL1Q00532 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.15■□□□□ 0.5
CDKL1Q00532 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC18.15■□□□□ 0.5
CDKL1Q00532 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.15■□□□□ 0.5
CDKL1Q00532 MIR4674-201ENST00000582457 87 ntBASIC18.15■□□□□ 0.5
CDKL1Q00532 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.15■□□□□ 0.5
CDKL1Q00532 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKL1Q00532 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CDKL1Q00532 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKL1Q00532 AC034236.2-201ENST00000606662 1610 ntBASIC18.15■□□□□ 0.5
CDKL1Q00532 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKL1Q00532 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKL1Q00532 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CDKL1Q00532 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKL1Q00532 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CDKL1Q00532 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CDKL1Q00532 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CDKL1Q00532 AC092338.2-201ENST00000568827 1415 ntBASIC18.15■□□□□ 0.5
CDKL1Q00532 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDKL1Q00532 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CDKL1Q00532 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CDKL1Q00532 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.5
CDKL1Q00532 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
CDKL1Q00532 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CDKL1Q00532 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC18.14■□□□□ 0.5
CDKL1Q00532 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL1Q00532 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDKL1Q00532 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL1Q00532 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKL1Q00532 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.14■□□□□ 0.49
CDKL1Q00532 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.14■□□□□ 0.49
CDKL1Q00532 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL1Q00532 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL1Q00532 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL1Q00532 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CDKL1Q00532 C2orf69P3-201ENST00000565542 1120 ntBASIC18.14■□□□□ 0.49
CDKL1Q00532 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKL1Q00532 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL1Q00532 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL1Q00532 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.14■□□□□ 0.49
CDKL1Q00532 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.14■□□□□ 0.49
CDKL1Q00532 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CDKL1Q00532 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CDKL1Q00532 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL1Q00532 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL1Q00532 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL1Q00532 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL1Q00532 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
CDKL1Q00532 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDKL1Q00532 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL1Q00532 AC099398.1-201ENST00000567919 2776 ntBASIC18.13■□□□□ 0.49
CDKL1Q00532 HIST1H2APS4-201ENST00000362070 348 ntBASIC18.13■□□□□ 0.49
CDKL1Q00532 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.13■□□□□ 0.49
CDKL1Q00532 MIR1238-201ENST00000408483 83 ntBASIC18.13■□□□□ 0.49
CDKL1Q00532 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL1Q00532 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.13■□□□□ 0.49
CDKL1Q00532 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKL1Q00532 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL1Q00532 ELP6-205ENST00000439305 880 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL1Q00532 AP003041.3-201ENST00000527151 707 ntBASIC18.13■□□□□ 0.49
CDKL1Q00532 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC18.13■□□□□ 0.49
CDKL1Q00532 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL1Q00532 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC18.13■□□□□ 0.49
CDKL1Q00532 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKL1Q00532 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC18.13■□□□□ 0.49
CDKL1Q00532 AC116562.4-202ENST00000641738 218 ntBASIC18.13■□□□□ 0.49
CDKL1Q00532 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
CDKL1Q00532 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
CDKL1Q00532 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL1Q00532 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
CDKL1Q00532 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL1Q00532 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
CDKL1Q00532 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
CDKL1Q00532 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
CDKL1Q00532 MYLKP1-201ENST00000509077 1580 ntBASIC18.13■□□□□ 0.49
CDKL1Q00532 AL162741.1-201ENST00000565563 1558 ntBASIC18.13■□□□□ 0.49
CDKL1Q00532 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL1Q00532 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKL1Q00532 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
CDKL1Q00532 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.12■□□□□ 0.49
CDKL1Q00532 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.12■□□□□ 0.49
CDKL1Q00532 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.12■□□□□ 0.49
CDKL1Q00532 TSPY14P-201ENST00000303979 915 ntBASIC18.12■□□□□ 0.49
CDKL1Q00532 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.12■□□□□ 0.49
CDKL1Q00532 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC18.12■□□□□ 0.49
CDKL1Q00532 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms