Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CKS1BP61024 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 AC141586.3-201ENST00000562166 1838 ntBASIC12.92□□□□□ -0.34
CKS1BP61024 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
CKS1BP61024 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS1BP61024 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS1BP61024 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
CKS1BP61024 LSM12P1-201ENST00000411836 588 ntBASIC12.92□□□□□ -0.34
CKS1BP61024 AC007322.1-201ENST00000426983 750 ntBASIC12.92□□□□□ -0.34
CKS1BP61024 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC12.92□□□□□ -0.34
CKS1BP61024 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 AC116351.2-201ENST00000606540 1585 ntBASIC12.92□□□□□ -0.34
CKS1BP61024 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CKS1BP61024 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.92□□□□□ -0.34
CKS1BP61024 AC231657.2-201ENST00000624556 255 ntBASIC12.92□□□□□ -0.34
CKS1BP61024 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
CKS1BP61024 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 HYMAI-201ENST00000635591 3347 ntBASIC12.92□□□□□ -0.34
CKS1BP61024 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CKS1BP61024 STK24-203ENST00000397517 4578 ntTSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CKS1BP61024 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CKS1BP61024 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CKS1BP61024 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CKS1BP61024 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 HACD1-201ENST00000326961 773 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC12.91□□□□□ -0.34
CKS1BP61024 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 CNN2P6-201ENST00000439038 900 ntBASIC12.91□□□□□ -0.34
CKS1BP61024 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
CKS1BP61024 DUX4L16-201ENST00000555130 1264 ntBASIC12.91□□□□□ -0.34
CKS1BP61024 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC12.91□□□□□ -0.34
CKS1BP61024 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 AC011767.1-201ENST00000617410 1153 ntBASIC12.91□□□□□ -0.34
CKS1BP61024 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC12.91□□□□□ -0.34
CKS1BP61024 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
CKS1BP61024 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC12.91□□□□□ -0.34
CKS1BP61024 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC12.91□□□□□ -0.34
CKS1BP61024 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
CKS1BP61024 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CKS1BP61024 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms