Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC15.04■□□□□ -0
SPCS3P61009 KRT8P32-201ENST00000512863 1461 ntBASIC15.04■□□□□ -0
SPCS3P61009 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC15.04■□□□□ -0
SPCS3P61009 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 MAP2K4P1-201ENST00000438453 1195 ntBASIC15.04■□□□□ -0
SPCS3P61009 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.04■□□□□ -0
SPCS3P61009 AC098934.4-201ENST00000564127 592 ntBASIC15.04■□□□□ -0
SPCS3P61009 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC15.04■□□□□ -0
SPCS3P61009 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
SPCS3P61009 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.04■□□□□ -0
SPCS3P61009 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
SPCS3P61009 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
SPCS3P61009 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
SPCS3P61009 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC15.03■□□□□ -0
SPCS3P61009 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.03■□□□□ -0
SPCS3P61009 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.03■□□□□ -0
SPCS3P61009 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 CD276-201ENST00000318424 2738 ntTSL 5 BASIC15.03■□□□□ -0
SPCS3P61009 AC068418.2-201ENST00000577309 3703 ntBASIC15.03■□□□□ -0
SPCS3P61009 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SPCS3P61009 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.03■□□□□ -0
SPCS3P61009 CEP83-AS1-201ENST00000623122 2482 ntBASIC15.03■□□□□ -0
SPCS3P61009 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.03■□□□□ -0
SPCS3P61009 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.03■□□□□ -0
SPCS3P61009 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SPCS3P61009 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
SPCS3P61009 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 POU5F1P3-201ENST00000428824 1078 ntBASIC15.03■□□□□ -0
SPCS3P61009 AC069152.1-201ENST00000438030 544 ntBASIC15.03■□□□□ -0
SPCS3P61009 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC15.03■□□□□ -0
SPCS3P61009 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC15.03■□□□□ -0
SPCS3P61009 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC15.03■□□□□ -0
SPCS3P61009 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SPCS3P61009 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SPCS3P61009 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
SPCS3P61009 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPCS3P61009 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC15.02■□□□□ -0
SPCS3P61009 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
SPCS3P61009 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SPCS3P61009 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPCS3P61009 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPCS3P61009 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SPCS3P61009 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC15.02■□□□□ -0
SPCS3P61009 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPCS3P61009 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC15.02■□□□□ -0
SPCS3P61009 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC15.02■□□□□ -0
SPCS3P61009 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC15.02■□□□□ -0
SPCS3P61009 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC15.02■□□□□ -0
SPCS3P61009 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPCS3P61009 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC15.02■□□□□ -0
SPCS3P61009 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.02■□□□□ -0
SPCS3P61009 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC15.02□□□□□ -0.01
SPCS3P61009 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC15.02□□□□□ -0.01
SPCS3P61009 AL499627.1-201ENST00000569373 2188 ntBASIC15.02□□□□□ -0.01
SPCS3P61009 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC15.02□□□□□ -0.01
SPCS3P61009 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SPCS3P61009 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC15.01□□□□□ -0.01
SPCS3P61009 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SPCS3P61009 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SPCS3P61009 KRT8P3-201ENST00000519669 1449 ntBASIC15.01□□□□□ -0.01
SPCS3P61009 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SPCS3P61009 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS3P61009 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS3P61009 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.01□□□□□ -0.01
SPCS3P61009 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC15.01□□□□□ -0.01
SPCS3P61009 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC15.01□□□□□ -0.01
SPCS3P61009 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS3P61009 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SPCS3P61009 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
SPCS3P61009 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms