Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
SSR1P43307 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.63■□□□□ 0.73
SSR1P43307 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.63■□□□□ 0.73
SSR1P43307 AP000692.2-201ENST00000608391 879 ntBASIC19.63■□□□□ 0.73
SSR1P43307 AP001412.1-201ENST00000608405 714 ntBASIC19.63■□□□□ 0.73
SSR1P43307 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.63■□□□□ 0.73
SSR1P43307 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SSR1P43307 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC19.63■□□□□ 0.73
SSR1P43307 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
SSR1P43307 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 AL357033.4-201ENST00000617703 1807 ntBASIC19.62■□□□□ 0.73
SSR1P43307 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.62■□□□□ 0.73
SSR1P43307 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.62■□□□□ 0.73
SSR1P43307 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SSR1P43307 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.62■□□□□ 0.73
SSR1P43307 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.62■□□□□ 0.73
SSR1P43307 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC19.62■□□□□ 0.73
SSR1P43307 MESTP1-201ENST00000404287 994 ntBASIC19.62■□□□□ 0.73
SSR1P43307 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC19.62■□□□□ 0.73
SSR1P43307 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.62■□□□□ 0.73
SSR1P43307 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.62■□□□□ 0.73
SSR1P43307 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.62■□□□□ 0.73
SSR1P43307 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.62■□□□□ 0.73
SSR1P43307 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC19.62■□□□□ 0.73
SSR1P43307 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SSR1P43307 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC19.62■□□□□ 0.73
SSR1P43307 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
SSR1P43307 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.61■□□□□ 0.73
SSR1P43307 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 MME-217ENST00000616757 1315 ntTSL 5 BASIC19.61■□□□□ 0.73
SSR1P43307 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.61■□□□□ 0.73
SSR1P43307 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 ABHD17AP1-201ENST00000358206 933 ntBASIC19.61■□□□□ 0.73
SSR1P43307 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.61■□□□□ 0.73
SSR1P43307 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 AL355355.2-201ENST00000442321 338 ntBASIC19.61■□□□□ 0.73
SSR1P43307 NUDT16P1-203ENST00000513809 620 ntBASIC19.61■□□□□ 0.73
SSR1P43307 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.61■□□□□ 0.73
SSR1P43307 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 AC113410.3-201ENST00000623366 203 ntBASIC19.61■□□□□ 0.73
SSR1P43307 DECR2-212ENST00000627716 352 ntTSL 2 BASIC19.61■□□□□ 0.73
SSR1P43307 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SSR1P43307 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.61■□□□□ 0.73
SSR1P43307 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.61■□□□□ 0.73
SSR1P43307 AL390961.4-201ENST00000623958 2535 ntBASIC19.61■□□□□ 0.73
SSR1P43307 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SSR1P43307 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 AC135050.7-201ENST00000624508 2218 ntBASIC19.6■□□□□ 0.73
SSR1P43307 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SSR1P43307 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 FZD10-202ENST00000539839 3282 ntBASIC19.6■□□□□ 0.73
SSR1P43307 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 AR-207ENST00000612010 3896 ntTSL 5 BASIC19.6■□□□□ 0.73
SSR1P43307 MFAP1P1-201ENST00000442257 1255 ntBASIC19.6■□□□□ 0.73
SSR1P43307 AC097488.1-201ENST00000507834 756 ntBASIC19.6■□□□□ 0.73
SSR1P43307 PENK-204ENST00000518770 863 ntTSL 2 BASIC19.6■□□□□ 0.73
SSR1P43307 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.6■□□□□ 0.73
SSR1P43307 AL049637.2-201ENST00000641778 930 ntBASIC19.6■□□□□ 0.73
SSR1P43307 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC19.6■□□□□ 0.73
SSR1P43307 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
SSR1P43307 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SSR1P43307 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
SSR1P43307 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SSR1P43307 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
SSR1P43307 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
SSR1P43307 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SSR1P43307 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
SSR1P43307 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
SSR1P43307 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms